| Chain sequence(s) |
A: MGSSHHHHHHGSGMSDSEVNQEAKPEVKPEVKPETHINLKVSDGSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDSLRFLYDGIRIQADQTPEDLDMEDNDIIEAHREQIGGMPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHFQEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKALCILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWGPYAGWAQAVLFSADLRQSRHAQEPYPYDVPDYAGGGGSGGGGSGGGGSHGLASTLTRWAHYNALIRAF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:57)
[INFO] Main: Simulation completed successfully. (00:06:00)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7513 | |
| 2 | G | A | -0.1567 | |
| 3 | S | A | -0.5824 | |
| 4 | S | A | -1.1745 | |
| 5 | H | A | -1.9045 | |
| 6 | H | A | -2.2917 | |
| 7 | H | A | -2.4572 | |
| 8 | H | A | -2.4391 | |
| 9 | H | A | -2.3018 | |
| 10 | H | A | -1.9831 | |
| 11 | G | A | -1.3788 | |
| 12 | S | A | -0.6647 | |
| 13 | G | A | -0.2155 | |
| 14 | M | A | 0.3002 | |
| 15 | S | A | -0.7142 | |
| 16 | D | A | -2.1962 | |
| 17 | S | A | -1.7559 | |
| 18 | E | A | -1.9359 | |
| 19 | V | A | -0.2861 | |
| 20 | N | A | -1.9686 | |
| 21 | Q | A | -2.6397 | |
| 22 | E | A | -2.9401 | |
| 23 | A | A | -2.4069 | |
| 24 | K | A | -2.5868 | |
| 25 | P | A | -1.9201 | |
| 26 | E | A | -2.0174 | |
| 27 | V | A | -0.5671 | |
| 28 | K | A | -1.7377 | |
| 29 | P | A | -1.4564 | |
| 30 | E | A | -1.7690 | |
| 31 | V | A | -0.5796 | |
| 32 | K | A | -2.0009 | |
| 33 | P | A | -1.8401 | |
| 34 | E | A | -2.5483 | |
| 35 | T | A | -1.8721 | |
| 36 | H | A | -2.3684 | |
| 37 | I | A | 0.0000 | |
| 38 | N | A | -1.7825 | |
| 39 | L | A | 0.0000 | |
| 40 | K | A | -0.5942 | |
| 41 | V | A | 0.0000 | |
| 42 | S | A | -1.3756 | |
| 43 | D | A | -2.1155 | |
| 44 | G | A | -1.4967 | |
| 45 | S | A | -1.0199 | |
| 46 | S | A | -1.3000 | |
| 47 | E | A | -1.6688 | |
| 48 | I | A | 0.0989 | |
| 49 | F | A | 1.0992 | |
| 50 | F | A | -0.0646 | |
| 51 | K | A | -1.9872 | |
| 52 | I | A | 0.0000 | |
| 53 | K | A | -2.0665 | |
| 54 | K | A | -2.2918 | |
| 55 | T | A | -1.3916 | |
| 56 | T | A | -1.3492 | |
| 57 | P | A | -2.2337 | |
| 58 | L | A | 0.0000 | |
| 59 | R | A | -2.7432 | |
| 60 | R | A | -2.6614 | |
| 61 | L | A | 0.0000 | |
| 62 | M | A | 0.0000 | |
| 63 | E | A | -2.4469 | |
| 64 | A | A | -1.8427 | |
| 65 | F | A | 0.0000 | |
| 66 | A | A | 0.0000 | |
| 67 | K | A | -3.3811 | |
| 68 | R | A | -2.9868 | |
| 69 | Q | A | -2.3614 | |
| 70 | G | A | -2.3119 | |
| 71 | K | A | -2.8667 | |
| 72 | E | A | -3.0461 | |
| 73 | M | A | -2.7126 | |
| 74 | D | A | -2.7524 | |
| 75 | S | A | -2.5219 | |
| 76 | L | A | 0.0000 | |
| 77 | R | A | -2.7880 | |
| 78 | F | A | 0.0000 | |
| 79 | L | A | -1.1427 | |
| 80 | Y | A | 0.0000 | |
| 81 | D | A | -0.5089 | |
| 82 | G | A | -0.5904 | |
| 83 | I | A | -0.1069 | |
| 84 | R | A | -1.8516 | |
| 85 | I | A | 0.0000 | |
| 86 | Q | A | -2.3924 | |
| 87 | A | A | -2.5230 | |
| 88 | D | A | -3.0438 | |
| 89 | Q | A | -2.3552 | |
| 90 | T | A | -2.0577 | |
| 91 | P | A | 0.0000 | |
| 92 | E | A | -2.1650 | |
| 93 | D | A | -2.6031 | |
| 94 | L | A | -1.4681 | |
| 95 | D | A | -1.7110 | |
| 96 | M | A | 0.0000 | |
| 97 | E | A | -2.0440 | |
| 98 | D | A | -2.8067 | |
| 99 | N | A | -2.4617 | |
| 100 | D | A | 0.0000 | |
| 101 | I | A | -0.3451 | |
| 102 | I | A | 0.0000 | |
| 103 | E | A | -2.0550 | |
| 104 | A | A | 0.0000 | |
| 105 | H | A | -2.6251 | |
| 106 | R | A | -3.2654 | |
| 107 | E | A | -2.8143 | |
| 108 | Q | A | -1.5586 | |
| 109 | I | A | 0.4320 | |
| 110 | G | A | 0.0317 | |
| 111 | G | A | -0.0016 | |
| 112 | M | A | 0.4249 | |
| 113 | P | A | -0.3712 | |
| 114 | A | A | -0.2074 | |
| 115 | R | A | -1.1195 | |
| 116 | A | A | 0.0245 | |
| 117 | L | A | 1.5000 | |
| 118 | L | A | 0.9497 | |
| 119 | P | A | -0.6819 | |
| 120 | R | A | -2.5106 | |
| 121 | R | A | -3.1535 | |
| 122 | M | A | -2.1409 | |
| 123 | G | A | -1.7952 | |
| 124 | H | A | -1.0759 | |
| 125 | R | A | 0.0000 | |
| 126 | T | A | -0.0762 | |
| 127 | L | A | 0.2282 | |
| 128 | A | A | 0.0443 | |
| 129 | S | A | -0.1465 | |
| 130 | T | A | -0.0637 | |
| 131 | P | A | -0.3072 | |
| 132 | A | A | -0.3466 | |
| 133 | L | A | -0.5982 | |
| 134 | W | A | 0.0000 | |
| 135 | A | A | -0.5964 | |
| 136 | S | A | -0.7173 | |
| 137 | I | A | 0.0000 | |
| 138 | P | A | -1.2209 | |
| 139 | C | A | 0.0000 | |
| 140 | P | A | -2.3252 | |
| 141 | R | A | -2.3654 | |
| 142 | S | A | -1.4060 | |
| 143 | E | A | -1.0883 | |
| 144 | L | A | 0.0000 | |
| 145 | R | A | -1.0434 | |
| 146 | L | A | 0.0000 | |
| 147 | D | A | -0.9306 | |
| 148 | L | A | 0.0000 | |
| 149 | V | A | 0.0000 | |
| 150 | L | A | 0.0000 | |
| 151 | P | A | -0.5714 | |
| 152 | S | A | -0.0783 | |
| 153 | G | A | 0.0934 | |
| 154 | Q | A | 0.0000 | |
| 155 | S | A | 0.0000 | |
| 156 | F | A | 0.0000 | |
| 157 | R | A | -0.5631 | |
| 158 | W | A | 0.0000 | |
| 159 | R | A | -1.8899 | |
| 160 | E | A | -2.3486 | |
| 161 | Q | A | -1.5148 | |
| 162 | S | A | -1.0166 | |
| 163 | P | A | -0.7457 | |
| 164 | A | A | -0.6777 | |
| 165 | H | A | -0.9623 | |
| 166 | W | A | 0.0000 | |
| 167 | S | A | 0.0000 | |
| 168 | G | A | 0.0000 | |
| 169 | V | A | 0.0000 | |
| 170 | L | A | 0.0000 | |
| 171 | A | A | -1.1212 | |
| 172 | D | A | -1.9001 | |
| 173 | Q | A | -1.2470 | |
| 174 | V | A | 0.0000 | |
| 175 | W | A | 0.0000 | |
| 176 | T | A | 0.0000 | |
| 177 | L | A | 0.0000 | |
| 178 | T | A | 0.0000 | |
| 179 | Q | A | -1.3345 | |
| 180 | T | A | -1.9091 | |
| 181 | E | A | -3.2184 | |
| 182 | E | A | -3.4046 | |
| 183 | Q | A | -2.3083 | |
| 184 | L | A | 0.0000 | |
| 185 | H | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | T | A | 0.0000 | |
| 188 | V | A | 0.0000 | |
| 189 | Y | A | 0.0000 | |
| 190 | R | A | -1.6570 | |
| 191 | G | A | -1.9164 | |
| 192 | D | A | -2.9160 | |
| 193 | K | A | -2.9964 | |
| 194 | S | A | -2.2167 | |
| 195 | Q | A | -2.0317 | |
| 196 | A | A | -1.4768 | |
| 197 | S | A | -1.3027 | |
| 198 | R | A | -1.8817 | |
| 199 | P | A | 0.0000 | |
| 200 | T | A | -1.4588 | |
| 201 | P | A | -1.7015 | |
| 202 | D | A | -2.5805 | |
| 203 | E | A | -1.9739 | |
| 204 | L | A | -1.8909 | |
| 205 | E | A | -2.6832 | |
| 206 | A | A | -1.9004 | |
| 207 | V | A | 0.0000 | |
| 208 | R | A | -2.7220 | |
| 209 | K | A | -2.6000 | |
| 210 | Y | A | -1.4846 | |
| 211 | F | A | 0.0000 | |
| 212 | Q | A | -1.5718 | |
| 213 | L | A | -1.5317 | |
| 214 | D | A | -2.0635 | |
| 215 | V | A | -0.9031 | |
| 216 | T | A | -0.7412 | |
| 217 | L | A | 0.0000 | |
| 218 | A | A | -0.9907 | |
| 219 | Q | A | -1.6222 | |
| 220 | L | A | -0.8696 | |
| 221 | Y | A | -1.3948 | |
| 222 | H | A | -1.7820 | |
| 223 | H | A | -1.4913 | |
| 224 | W | A | 0.0000 | |
| 225 | G | A | 0.0000 | |
| 226 | S | A | -0.4724 | |
| 227 | V | A | 0.4873 | |
| 228 | D | A | 0.0000 | |
| 229 | S | A | -0.9347 | |
| 230 | H | A | -1.1511 | |
| 231 | F | A | 0.0000 | |
| 232 | Q | A | -2.6659 | |
| 233 | E | A | -3.0186 | |
| 234 | V | A | -2.0179 | |
| 235 | A | A | -2.2157 | |
| 236 | Q | A | -2.8387 | |
| 237 | K | A | -2.7256 | |
| 238 | F | A | -1.6446 | |
| 239 | Q | A | -1.5691 | |
| 240 | G | A | 0.0000 | |
| 241 | V | A | 0.0000 | |
| 242 | R | A | 0.0000 | |
| 243 | L | A | 0.0000 | |
| 244 | L | A | 0.0000 | |
| 245 | R | A | -1.5399 | |
| 246 | Q | A | 0.0000 | |
| 247 | D | A | -1.7847 | |
| 248 | P | A | 0.0000 | |
| 249 | I | A | 0.0000 | |
| 250 | E | A | -0.7129 | |
| 251 | C | A | 0.0000 | |
| 252 | L | A | 0.0000 | |
| 253 | F | A | 0.0000 | |
| 254 | S | A | 0.0000 | |
| 255 | F | A | 0.0000 | |
| 256 | I | A | 0.0000 | |
| 257 | C | A | 0.0000 | |
| 258 | S | A | -0.3862 | |
| 259 | S | A | -0.9379 | |
| 260 | N | A | -1.7431 | |
| 261 | N | A | -0.9841 | |
| 262 | N | A | -0.4460 | |
| 263 | I | A | 0.5283 | |
| 264 | A | A | 0.2853 | |
| 265 | R | A | 0.0000 | |
| 266 | I | A | 0.0000 | |
| 267 | T | A | -0.3130 | |
| 268 | G | A | 0.0000 | |
| 269 | M | A | 0.0000 | |
| 270 | V | A | 0.0000 | |
| 271 | E | A | -1.0812 | |
| 272 | R | A | -0.9791 | |
| 273 | L | A | 0.0000 | |
| 274 | C | A | 0.0000 | |
| 275 | Q | A | -1.5993 | |
| 276 | A | A | -0.7918 | |
| 277 | F | A | -0.4738 | |
| 278 | G | A | -0.7755 | |
| 279 | P | A | -1.3816 | |
| 280 | R | A | -2.1335 | |
| 281 | L | A | -1.5356 | |
| 282 | I | A | 0.0000 | |
| 283 | Q | A | -2.1596 | |
| 284 | L | A | 0.0000 | |
| 285 | D | A | -3.2489 | |
| 286 | D | A | -2.8779 | |
| 287 | V | A | -1.4884 | |
| 288 | T | A | -1.4983 | |
| 289 | Y | A | 0.0000 | |
| 290 | H | A | -1.5833 | |
| 291 | G | A | 0.0000 | |
| 292 | F | A | -0.7735 | |
| 293 | P | A | 0.0000 | |
| 294 | S | A | -0.3934 | |
| 295 | L | A | 0.0000 | |
| 296 | Q | A | -1.2959 | |
| 297 | A | A | -0.5841 | |
| 298 | L | A | 0.0000 | |
| 299 | A | A | -1.3253 | |
| 300 | G | A | -1.1542 | |
| 301 | P | A | -1.4721 | |
| 302 | E | A | -2.3502 | |
| 303 | V | A | 0.0000 | |
| 304 | E | A | -2.5199 | |
| 305 | A | A | -2.4659 | |
| 306 | H | A | -2.3663 | |
| 307 | L | A | 0.0000 | |
| 308 | R | A | -3.1787 | |
| 309 | K | A | -2.9695 | |
| 310 | L | A | -1.5928 | |
| 311 | G | A | -1.5953 | |
| 312 | L | A | 0.0000 | |
| 313 | G | A | -1.3107 | |
| 314 | Y | A | 0.0780 | |
| 315 | R | A | 0.0000 | |
| 316 | A | A | 0.0000 | |
| 317 | R | A | -1.2612 | |
| 318 | Y | A | -0.3473 | |
| 319 | V | A | 0.0000 | |
| 320 | S | A | 0.0000 | |
| 321 | A | A | -0.6825 | |
| 322 | S | A | 0.0000 | |
| 323 | A | A | 0.0000 | |
| 324 | R | A | -1.8893 | |
| 325 | A | A | -1.4718 | |
| 326 | I | A | 0.0000 | |
| 327 | L | A | -1.2954 | |
| 328 | E | A | -2.8946 | |
| 329 | E | A | -3.0175 | |
| 330 | Q | A | -1.7519 | |
| 331 | G | A | -1.1362 | |
| 332 | G | A | 0.0000 | |
| 333 | L | A | 0.6778 | |
| 334 | A | A | -0.1412 | |
| 335 | W | A | 0.0000 | |
| 336 | L | A | 0.0000 | |
| 337 | Q | A | -1.6881 | |
| 338 | Q | A | -2.1161 | |
| 339 | L | A | 0.0000 | |
| 340 | R | A | -2.1229 | |
| 341 | E | A | -2.8576 | |
| 342 | S | A | -2.3299 | |
| 343 | S | A | -2.0907 | |
| 344 | Y | A | 0.0000 | |
| 345 | E | A | -3.2491 | |
| 346 | E | A | -3.5603 | |
| 347 | A | A | 0.0000 | |
| 348 | H | A | -1.9920 | |
| 349 | K | A | -2.5157 | |
| 350 | A | A | -1.1273 | |
| 351 | L | A | 0.0000 | |
| 352 | C | A | 0.2863 | |
| 353 | I | A | 1.3581 | |
| 354 | L | A | 0.0000 | |
| 355 | P | A | 0.2156 | |
| 356 | G | A | 0.0823 | |
| 357 | V | A | 0.0000 | |
| 358 | G | A | -0.4417 | |
| 359 | T | A | -0.9883 | |
| 360 | K | A | -0.8545 | |
| 361 | V | A | 0.0000 | |
| 362 | A | A | 0.0000 | |
| 363 | D | A | 0.0000 | |
| 364 | C | A | 0.0000 | |
| 365 | I | A | 0.0000 | |
| 366 | C | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | M | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | L | A | 0.0000 | |
| 371 | D | A | -1.5641 | |
| 372 | K | A | 0.0000 | |
| 373 | P | A | -0.4608 | |
| 374 | Q | A | -0.6771 | |
| 375 | A | A | 0.0000 | |
| 376 | V | A | 0.0000 | |
| 377 | P | A | 0.0000 | |
| 378 | V | A | 0.0000 | |
| 379 | D | A | -0.2196 | |
| 380 | V | A | 0.7514 | |
| 381 | H | A | -0.0318 | |
| 382 | M | A | 0.0000 | |
| 383 | W | A | 0.0000 | |
| 384 | H | A | -1.1215 | |
| 385 | I | A | 0.0000 | |
| 386 | A | A | 0.0000 | |
| 387 | Q | A | -1.8648 | |
| 388 | R | A | -2.4658 | |
| 389 | D | A | -1.5892 | |
| 390 | Y | A | -0.8838 | |
| 391 | S | A | -1.1145 | |
| 392 | W | A | -0.7673 | |
| 393 | H | A | -1.0381 | |
| 394 | P | A | 0.0000 | |
| 395 | T | A | -0.7060 | |
| 396 | T | A | -0.6750 | |
| 397 | S | A | -1.3614 | |
| 398 | Q | A | -1.8142 | |
| 399 | A | A | -1.7512 | |
| 400 | K | A | -2.2660 | |
| 401 | G | A | -1.4036 | |
| 402 | P | A | -0.7677 | |
| 403 | S | A | -1.3107 | |
| 404 | P | A | -1.5622 | |
| 405 | Q | A | -2.2605 | |
| 406 | T | A | 0.0000 | |
| 407 | N | A | -1.8167 | |
| 408 | K | A | -2.6967 | |
| 409 | E | A | -1.8637 | |
| 410 | L | A | 0.0000 | |
| 411 | G | A | 0.0000 | |
| 412 | N | A | -1.5094 | |
| 413 | F | A | -0.5031 | |
| 414 | F | A | 0.0000 | |
| 415 | R | A | -0.7467 | |
| 416 | S | A | -0.4781 | |
| 417 | L | A | 0.2216 | |
| 418 | W | A | 0.0000 | |
| 419 | G | A | -0.3696 | |
| 420 | P | A | -0.3607 | |
| 421 | Y | A | 0.0228 | |
| 422 | A | A | 0.0000 | |
| 423 | G | A | 0.0000 | |
| 424 | W | A | 0.0000 | |
| 425 | A | A | 0.0000 | |
| 426 | Q | A | 0.0000 | |
| 427 | A | A | 0.0000 | |
| 428 | V | A | 0.0000 | |
| 429 | L | A | 0.0000 | |
| 430 | F | A | -0.0125 | |
| 431 | S | A | 0.0000 | |
| 432 | A | A | 0.0000 | |
| 433 | D | A | -0.9765 | |
| 434 | L | A | -1.0617 | |
| 435 | R | A | -2.0387 | |
| 436 | Q | A | -2.4550 | |
| 437 | S | A | -2.4184 | |
| 438 | R | A | -3.6481 | |
| 439 | H | A | -2.9312 | |
| 440 | A | A | -2.2626 | |
| 441 | Q | A | -3.0383 | |
| 442 | E | A | -2.8629 | |
| 443 | P | A | -0.9807 | |
| 444 | Y | A | 0.3738 | |
| 445 | P | A | 0.5515 | |
| 446 | Y | A | 1.1432 | |
| 447 | D | A | -0.3902 | |
| 448 | V | A | 0.9538 | |
| 449 | P | A | -0.0272 | |
| 450 | D | A | -1.0073 | |
| 451 | Y | A | 0.5261 | |
| 452 | A | A | -0.1398 | |
| 453 | G | A | -0.6579 | |
| 454 | G | A | -0.8640 | |
| 455 | G | A | -1.0666 | |
| 456 | G | A | -0.9914 | |
| 457 | S | A | -0.8577 | |
| 458 | G | A | -0.9990 | |
| 459 | G | A | -1.0733 | |
| 460 | G | A | -1.0661 | |
| 461 | G | A | -1.0015 | |
| 462 | S | A | -0.8698 | |
| 463 | G | A | -1.0028 | |
| 464 | G | A | -1.0862 | |
| 465 | G | A | -1.1828 | |
| 466 | G | A | -1.2457 | |
| 467 | S | A | -0.9202 | |
| 468 | H | A | -1.1386 | |
| 469 | G | A | -0.3534 | |
| 470 | L | A | 1.3045 | |
| 471 | A | A | 0.5715 | |
| 472 | S | A | 0.1902 | |
| 473 | T | A | 0.6715 | |
| 474 | L | A | 1.4802 | |
| 475 | T | A | 0.1652 | |
| 476 | R | A | -1.1740 | |
| 477 | W | A | 0.4000 | |
| 478 | A | A | -0.1033 | |
| 479 | H | A | -0.7028 | |
| 480 | Y | A | -0.1566 | |
| 481 | N | A | -1.0151 | |
| 482 | A | A | -0.3270 | |
| 483 | L | A | 0.9057 | |
| 484 | I | A | 0.6449 | |
| 485 | R | A | -0.9205 | |
| 486 | A | A | 0.5348 | |
| 487 | F | A | 1.7703 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine