| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGFTLSDYYMSWVRQAPGKGLEWMGIIYPGDSDTRYSPSFQGHVTISRDDSKNTLYLQMNSLRAEDTAVYYCTRWGAGKDVWGQGTTVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:00)
[INFO] Main: Simulation completed successfully. (00:00:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.9591 | |
| 2 | V | A | -0.8788 | |
| 3 | Q | A | -1.1111 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.6972 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.5109 | |
| 8 | G | A | -0.8147 | |
| 9 | G | A | -0.3970 | |
| 10 | G | A | 0.4177 | |
| 11 | L | A | 1.1388 | |
| 12 | V | A | -0.0245 | |
| 13 | Q | A | -1.3598 | |
| 14 | P | A | -1.6589 | |
| 15 | G | A | -1.5210 | |
| 16 | G | A | -1.0895 | |
| 17 | S | A | -1.4046 | |
| 18 | L | A | -1.0201 | |
| 19 | R | A | -2.1485 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4345 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.2098 | |
| 24 | A | A | -0.3762 | |
| 25 | S | A | -0.7365 | |
| 26 | G | A | -1.0996 | |
| 27 | F | A | -0.6416 | |
| 28 | T | A | -0.8168 | |
| 29 | L | A | 0.0000 | |
| 30 | S | A | -1.5915 | |
| 31 | D | A | -1.7317 | |
| 32 | Y | A | 0.0707 | |
| 33 | Y | A | 0.6657 | |
| 34 | M | A | 0.0000 | |
| 35 | S | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | V | A | 0.0000 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -0.5708 | |
| 40 | A | A | -1.1999 | |
| 41 | P | A | -1.3308 | |
| 42 | G | A | -1.4384 | |
| 43 | K | A | -2.1242 | |
| 44 | G | A | -0.9451 | |
| 45 | L | A | 0.5515 | |
| 46 | E | A | -0.2228 | |
| 47 | W | A | 0.5293 | |
| 48 | M | A | 0.0000 | |
| 49 | G | A | 0.0000 | |
| 50 | I | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | Y | A | -0.6039 | |
| 53 | P | A | -1.0236 | |
| 54 | G | A | -1.8956 | |
| 55 | D | A | -2.3960 | |
| 56 | S | A | -1.7082 | |
| 57 | D | A | -1.6106 | |
| 58 | T | A | -1.3074 | |
| 59 | R | A | -2.0332 | |
| 60 | Y | A | -1.1613 | |
| 61 | S | A | -0.7661 | |
| 62 | P | A | -1.0246 | |
| 63 | S | A | -0.7370 | |
| 64 | F | A | 0.0000 | |
| 65 | Q | A | -1.8275 | |
| 66 | G | A | -1.2611 | |
| 67 | H | A | -1.0709 | |
| 68 | V | A | 0.0000 | |
| 69 | T | A | -0.9909 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.6173 | |
| 72 | R | A | -1.2334 | |
| 73 | D | A | -2.0625 | |
| 74 | D | A | -2.7111 | |
| 75 | S | A | -2.0686 | |
| 76 | K | A | -2.6204 | |
| 77 | N | A | -1.9307 | |
| 78 | T | A | -1.1998 | |
| 79 | L | A | 0.0000 | |
| 80 | Y | A | -0.6159 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.3087 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -1.7150 | |
| 85 | S | A | -1.3676 | |
| 86 | L | A | 0.0000 | |
| 87 | R | A | -2.2159 | |
| 88 | A | A | -1.6775 | |
| 89 | E | A | -2.2131 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.6572 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | 0.2586 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | 0.4790 | |
| 96 | C | A | 0.0000 | |
| 97 | T | A | 0.0000 | |
| 98 | R | A | -0.0022 | |
| 99 | W | A | 0.6488 | |
| 100 | G | A | -0.3163 | |
| 101 | A | A | -0.7956 | |
| 102 | G | A | -1.4096 | |
| 103 | K | A | -2.1551 | |
| 104 | D | A | -1.3614 | |
| 105 | V | A | -0.4278 | |
| 106 | W | A | 0.3001 | |
| 107 | G | A | 0.0000 | |
| 108 | Q | A | -0.7949 | |
| 109 | G | A | -0.2212 | |
| 110 | T | A | -0.1835 | |
| 111 | T | A | 0.1125 | |
| 112 | V | A | 0.0000 | |
| 113 | T | A | -0.0321 | |
| 114 | V | A | 0.0000 | |
| 115 | S | A | -0.7464 | |
| 116 | S | A | -0.5561 |