| Chain sequence(s) |
A: GSSVSSVPTKLEVVAATPTSLLISWDASSSSVSHYEITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYYSHEDIFYAVSPSSINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:24)
[INFO] Main: Simulation completed successfully. (00:00:25)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.4210 | |
| 2 | S | A | -0.1071 | |
| 3 | S | A | 0.3537 | |
| 4 | V | A | 1.4822 | |
| 5 | S | A | 0.5702 | |
| 6 | S | A | 0.2034 | |
| 7 | V | A | -0.1509 | |
| 8 | P | A | 0.0000 | |
| 9 | T | A | -1.2967 | |
| 10 | K | A | -2.6385 | |
| 11 | L | A | 0.0000 | |
| 12 | E | A | -1.6474 | |
| 13 | V | A | 0.2581 | |
| 14 | V | A | 1.6228 | |
| 15 | A | A | 0.9360 | |
| 16 | A | A | 0.2970 | |
| 17 | T | A | -0.3861 | |
| 18 | P | A | -0.8078 | |
| 19 | T | A | -0.5278 | |
| 20 | S | A | -0.3137 | |
| 21 | L | A | 0.0000 | |
| 22 | L | A | 0.7888 | |
| 23 | I | A | 0.0000 | |
| 24 | S | A | -0.6925 | |
| 25 | W | A | 0.0000 | |
| 26 | D | A | -2.5416 | |
| 27 | A | A | -1.2242 | |
| 28 | S | A | -0.8442 | |
| 29 | S | A | -0.6022 | |
| 30 | S | A | -0.3943 | |
| 31 | S | A | -0.3837 | |
| 32 | V | A | 0.0000 | |
| 33 | S | A | 0.0941 | |
| 34 | H | A | -0.0964 | |
| 35 | Y | A | 0.0000 | |
| 36 | E | A | -0.4855 | |
| 37 | I | A | 0.0000 | |
| 38 | T | A | -0.4839 | |
| 39 | Y | A | -0.2946 | |
| 40 | G | A | 0.0000 | |
| 41 | E | A | -1.3031 | |
| 42 | T | A | -1.2002 | |
| 43 | G | A | -1.2122 | |
| 44 | G | A | -1.3333 | |
| 45 | N | A | -1.5367 | |
| 46 | S | A | -0.8518 | |
| 47 | P | A | -0.3135 | |
| 48 | V | A | 0.4590 | |
| 49 | Q | A | -0.8104 | |
| 50 | E | A | -1.6028 | |
| 51 | F | A | -0.5716 | |
| 52 | T | A | -0.2694 | |
| 53 | V | A | -0.0786 | |
| 54 | P | A | -0.4191 | |
| 55 | G | A | -0.4418 | |
| 56 | S | A | -0.4425 | |
| 57 | S | A | -0.4737 | |
| 58 | S | A | -0.6636 | |
| 59 | T | A | -0.2201 | |
| 60 | A | A | 0.0000 | |
| 61 | T | A | 0.2373 | |
| 62 | I | A | 0.0000 | |
| 63 | S | A | -0.4727 | |
| 64 | G | A | -0.6839 | |
| 65 | L | A | 0.0000 | |
| 66 | S | A | -0.8262 | |
| 67 | P | A | -0.9846 | |
| 68 | G | A | -1.0731 | |
| 69 | V | A | -0.9126 | |
| 70 | D | A | -1.7981 | |
| 71 | Y | A | 0.0000 | |
| 72 | T | A | -0.7584 | |
| 73 | I | A | 0.0000 | |
| 74 | T | A | -0.3976 | |
| 75 | V | A | 0.0000 | |
| 76 | Y | A | 0.4107 | |
| 77 | A | A | 0.0000 | |
| 78 | Y | A | 1.2363 | |
| 79 | Y | A | 0.9146 | |
| 80 | S | A | 0.2308 | |
| 81 | H | A | -0.7381 | |
| 82 | E | A | -2.1212 | |
| 83 | D | A | -1.4476 | |
| 84 | I | A | 1.2874 | |
| 85 | F | A | 2.4959 | |
| 86 | Y | A | 2.3220 | |
| 87 | A | A | 1.4348 | |
| 88 | V | A | 0.7830 | |
| 89 | S | A | 0.0839 | |
| 90 | P | A | -0.0214 | |
| 91 | S | A | -0.4419 | |
| 92 | S | A | -0.6383 | |
| 93 | I | A | -0.7451 | |
| 94 | N | A | -1.6713 | |
| 95 | Y | A | -1.3801 | |
| 96 | R | A | -2.3087 | |
| 97 | T | A | -1.1710 |