Project name: query_structure

Status: done

Started: 2026-03-16 21:45:07
Settings
Chain sequence(s) A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFNIAYWEPGIGGEAIWLRVPGSERSYDLTGLKPGTEYKVWIHGVKGGASSPPLIARFTT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:50)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:50)
Show buried residues

Minimal score value
-3.0523
Maximal score value
1.8423
Average score
-0.667
Total score value
-60.0322

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.0638
2 L A 0.4435
3 P A -0.2042
4 A A -0.5110
5 P A 0.0000
6 K A -2.0561
7 N A -1.3080
8 L A 0.0850
9 V A 0.9562
10 V A 0.0419
11 S A -0.5895
12 R A -1.9912
13 V A -1.0117
14 T A -1.7870
15 E A -3.0523
16 D A -2.7732
17 S A -2.0663
18 A A 0.0000
19 R A -1.1489
20 L A 0.0000
21 S A -0.3692
22 W A 0.0000
23 T A -1.3225
24 A A -1.4174
25 P A -1.3993
26 D A -2.2754
27 A A -1.4233
28 A A -1.1684
29 F A 0.0000
30 D A -2.4183
31 S A 0.0000
32 F A 0.0000
33 N A -0.5586
34 I A 0.0000
35 A A 0.0000
36 Y A 0.5450
37 W A -0.2021
38 E A -0.9061
39 P A -0.6831
40 G A 0.1357
41 I A 1.2431
42 G A -0.1461
43 G A -0.4662
44 E A -1.2906
45 A A -0.1050
46 I A 1.0876
47 W A 1.1865
48 L A 0.2287
49 R A -1.5465
50 V A 0.0000
51 P A -1.5357
52 G A 0.0000
53 S A -1.6181
54 E A -1.5349
55 R A -1.1486
56 S A -0.6178
57 Y A -0.6737
58 D A -1.5432
59 L A 0.0000
60 T A -1.3290
61 G A -1.5090
62 L A 0.0000
63 K A -3.0269
64 P A -2.5883
65 G A -1.8634
66 T A -1.9082
67 E A -2.2812
68 Y A 0.0000
69 K A -0.8246
70 V A 0.0000
71 W A 1.1221
72 I A 0.0000
73 H A -0.2494
74 G A 0.0000
75 V A -1.2016
76 K A -1.6547
77 G A -1.3824
78 G A -1.1128
79 A A -0.5713
80 S A -0.2878
81 S A 0.0000
82 P A 0.2605
83 P A 0.3233
84 L A 0.7843
85 I A 1.8423
86 A A 0.3853
87 R A -1.5201
88 F A 0.0000
89 T A -1.6551
90 T A -1.9317
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Laboratory of Theory of Biopolymers 2018