Project name: M-Qmutant [mutate: FS22A, FD62A, LE82A, FR133A, VK167A]

Status: done

Started: 2025-12-13 12:54:55
Settings
Chain sequence(s) A: MGSSLDDFCNDSTAPQKVLLAFSITYTPVMIYALKVSRGRLLGLLHLLIFLNCAFTFGYMTFVHFESTNRVALTMGAVVALLWGVYSAIETWKFITSRCRLCLLGRKYILAPAHHVESAAGFHPIAANDNHAFVVRRPGSTTVQGTLVPGLKSLVLGGRKAVKQGVVNLVKYAK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues LE82A,FR133A,FS22A,VK167A,FD62A
Energy difference between WT (input) and mutated protein (by FoldX) 1.9581 kcal/mol

CAUTION: Your mutation/s can destabilize the protein structure

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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:01:15)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:01:50)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:04)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:06)
Show buried residues

Minimal score value
-3.372
Maximal score value
2.657
Average score
0.0845
Total score value
14.6972

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.7606
2 G A 0.1133
3 S A -0.3882
4 S A -0.3396
5 L A 0.3244
6 D A -1.7660
7 D A -2.0620
8 F A -0.2934
9 C A -0.3977
10 N A -1.7339
11 D A -1.5217
12 S A -0.7805
13 T A -0.5482
14 A A -0.2852
15 P A 0.1031
16 Q A -0.3193
17 K A -0.0930
18 V A 1.4142
19 L A 1.5367
20 L A 0.0000
21 A A 1.2550
22 S A 1.3053 mutated: FS22A
23 S A 0.0000
24 I A 2.1806
25 T A 1.6373
26 Y A 2.3421
27 T A 1.9439
28 P A 1.8152
29 V A 2.6570
30 M A 0.0000
31 I A 1.8115
32 Y A 2.1220
33 A A 1.3099
34 L A 0.7137
35 K A -0.4707
36 V A 1.0765
37 S A 0.0000
38 R A -1.8761
39 G A -1.5260
40 R A -1.0894
41 L A 0.5751
42 L A 0.2565
43 G A 0.8948
44 L A 2.0866
45 L A 0.0000
46 H A 0.0000
47 L A 2.1694
48 L A 2.1112
49 I A 0.0000
50 F A 2.1506
51 L A 2.3482
52 N A 1.8087
53 C A 1.5204
54 A A 1.4472
55 F A 1.3972
56 T A 1.3160
57 F A 0.6776
58 G A -0.0382
59 Y A 0.0615
60 M A 0.1948
61 T A -0.3547
62 D A -1.4129 mutated: FD62A
63 V A -0.0966
64 H A -0.5076
65 F A -0.3720
66 E A -1.9351
67 S A -1.7654
68 T A -1.1753
69 N A -1.6179
70 R A -1.4567
71 V A 0.8426
72 A A 0.4950
73 L A 0.7359
74 T A 0.9829
75 M A 2.2148
76 G A 1.5780
77 A A 1.8045
78 V A 2.2258
79 V A 2.5583
80 A A 2.0616
81 L A 2.2893
82 E A 0.6502 mutated: LE82A
83 W A 1.5058
84 G A 2.0037
85 V A 2.2968
86 Y A 1.9243
87 S A 0.0000
88 A A 1.5227
89 I A 2.0271
90 E A 0.9571
91 T A 1.7177
92 W A 1.7472
93 K A 0.3193
94 F A 1.2059
95 I A 2.2812
96 T A 0.9926
97 S A 0.4079
98 R A 1.1815
99 C A 1.4464
100 R A 0.3251
101 L A 0.0000
102 C A 0.8996
103 L A 1.4403
104 L A 0.1134
105 G A -0.6233
106 R A -1.8291
107 K A -1.9772
108 Y A 0.0000
109 I A 0.7527
110 L A 1.1182
111 A A 0.0000
112 P A -0.3304
113 A A -0.5048
114 H A -1.3809
115 H A 0.0000
116 V A 0.0000
117 E A 0.0000
118 S A 0.0000
119 A A -0.4039
120 A A -0.0421
121 G A -0.2183
122 F A 0.3540
123 H A -0.3146
124 P A -0.4206
125 I A 0.0000
126 A A -0.7716
127 A A -2.0507
128 N A -2.5801
129 D A -3.3720
130 N A -3.1808
131 H A -2.8110
132 A A -2.1121
133 R A -2.0779 mutated: FR133A
134 V A -0.7768
135 V A -0.8565
136 R A -2.2572
137 R A -2.0215
138 P A -1.4058
139 G A -1.2627
140 S A -0.8993
141 T A 0.0000
142 T A -0.2761
143 V A 0.0000
144 Q A -1.2116
145 G A -0.6008
146 T A 0.2975
147 L A 1.2544
148 V A 0.0000
149 P A -0.2897
150 G A -0.7499
151 L A -0.6849
152 K A -1.6781
153 S A -0.8918
154 L A -0.6224
155 V A 0.0000
156 L A 0.0000
157 G A -2.0071
158 G A 0.0000
159 R A -2.3006
160 K A -1.9051
161 A A -1.1211
162 V A 0.0011
163 K A -1.4863
164 Q A -1.5591
165 G A -1.0435
166 V A 0.1324
167 K A -1.0642 mutated: VK167A
168 N A -0.6374
169 L A 1.2155
170 V A 1.4966
171 K A -0.1119
172 Y A 0.7416
173 A A -0.3785
174 K A -1.5348
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Laboratory of Theory of Biopolymers 2018