| Chain sequence(s) |
A: AIDLDIASPDSIKKAAGIAAAGLRKLYTGDRPGDVPGNLPDPYYWWECGAMFNAFIDYWYYTGDDQYNNITQQAMIHQIGSYNAFMPQNQTSTLGNDDQAFWGMAAMSAAENAFPDVDDQPSWLSLAQGVFNTQASRWDQTSCGGGLKWQIFTFNNGYNYKNTISNGCFFNIASRLYKYTGNETYITWAERAWEWELAVGLMSQDYHYFDGTDDRKNCSDVNRIQWTYNAGVHMAGAAALWNATGDEVWRERLLGIINGTDIFFSKDAPNVMFEVACEQNGKCDVDQRSFKAYLSRWMGYTAKVAPFTREAIMTRLSASAQAAAKQCNAGEDQQTCGLRWTNNGVNDGSFGVGEQMAAMEVMQSLLLDQVAGPVTETKGGISKSDPSAGSGAQDKPI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:21)
[INFO] Main: Simulation completed successfully. (00:05:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -1.2566 | |
| 2 | I | A | 0.0000 | |
| 3 | D | A | -2.5422 | |
| 4 | L | A | -2.2507 | |
| 5 | D | A | -2.3118 | |
| 6 | I | A | -0.7152 | |
| 7 | A | A | -0.4581 | |
| 8 | S | A | -1.2278 | |
| 9 | P | A | -1.9160 | |
| 10 | D | A | -2.6614 | |
| 11 | S | A | -2.3946 | |
| 12 | I | A | 0.0000 | |
| 13 | K | A | -2.1317 | |
| 14 | K | A | -2.7345 | |
| 15 | A | A | 0.0000 | |
| 16 | A | A | 0.0000 | |
| 17 | G | A | -0.6904 | |
| 18 | I | A | -0.4127 | |
| 19 | A | A | 0.0000 | |
| 20 | A | A | 0.0000 | |
| 21 | A | A | -0.4329 | |
| 22 | G | A | -0.7200 | |
| 23 | L | A | 0.0000 | |
| 24 | R | A | -1.0611 | |
| 25 | K | A | -1.6878 | |
| 26 | L | A | -0.4922 | |
| 27 | Y | A | 0.0000 | |
| 28 | T | A | -1.3359 | |
| 29 | G | A | 0.0000 | |
| 30 | D | A | -2.0305 | |
| 31 | R | A | -2.6662 | |
| 32 | P | A | -1.7458 | |
| 33 | G | A | -1.5117 | |
| 34 | D | A | -1.7615 | |
| 35 | V | A | -0.2429 | |
| 36 | P | A | -0.8260 | |
| 37 | G | A | 0.0000 | |
| 38 | N | A | -0.3148 | |
| 39 | L | A | 0.0000 | |
| 40 | P | A | -0.8044 | |
| 41 | D | A | -1.7284 | |
| 42 | P | A | -0.9602 | |
| 43 | Y | A | -0.0411 | |
| 44 | Y | A | 0.8282 | |
| 45 | W | A | 0.0000 | |
| 46 | W | A | 0.0000 | |
| 47 | E | A | 0.0000 | |
| 48 | C | A | 0.0000 | |
| 49 | G | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | M | A | 0.0000 | |
| 52 | F | A | 0.0000 | |
| 53 | N | A | 0.0000 | |
| 54 | A | A | 0.0000 | |
| 55 | F | A | 0.0000 | |
| 56 | I | A | 0.0000 | |
| 57 | D | A | 0.0000 | |
| 58 | Y | A | 0.0000 | |
| 59 | W | A | -0.8775 | |
| 60 | Y | A | -0.2800 | |
| 61 | Y | A | -0.5119 | |
| 62 | T | A | -1.3085 | |
| 63 | G | A | -1.3721 | |
| 64 | D | A | -1.9918 | |
| 65 | D | A | -2.9322 | |
| 66 | Q | A | -2.5374 | |
| 67 | Y | A | 0.0000 | |
| 68 | N | A | -1.9258 | |
| 69 | N | A | -2.0771 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | 0.0000 | |
| 72 | Q | A | -1.0656 | |
| 73 | Q | A | -1.3710 | |
| 74 | A | A | 0.0000 | |
| 75 | M | A | 0.0000 | |
| 76 | I | A | -0.5234 | |
| 77 | H | A | -0.7548 | |
| 78 | Q | A | 0.0000 | |
| 79 | I | A | 0.0000 | |
| 80 | G | A | -0.9022 | |
| 81 | S | A | -0.5229 | |
| 82 | Y | A | -0.2536 | |
| 83 | N | A | -0.6483 | |
| 84 | A | A | 0.0000 | |
| 85 | F | A | 0.0000 | |
| 86 | M | A | 0.0000 | |
| 87 | P | A | 0.0000 | |
| 88 | Q | A | -1.6606 | |
| 89 | N | A | -2.0073 | |
| 90 | Q | A | -1.1458 | |
| 91 | T | A | -0.7834 | |
| 92 | S | A | -0.5499 | |
| 93 | T | A | -0.2139 | |
| 94 | L | A | 0.0000 | |
| 95 | G | A | 0.0000 | |
| 96 | N | A | 0.0000 | |
| 97 | D | A | -0.2023 | |
| 98 | D | A | -0.0790 | |
| 99 | Q | A | 0.0000 | |
| 100 | A | A | 0.0000 | |
| 101 | F | A | 0.0000 | |
| 102 | W | A | 0.0000 | |
| 103 | G | A | 0.0000 | |
| 104 | M | A | 0.0000 | |
| 105 | A | A | 0.0000 | |
| 106 | A | A | 0.0000 | |
| 107 | M | A | 0.0000 | |
| 108 | S | A | 0.0000 | |
| 109 | A | A | 0.0000 | |
| 110 | A | A | 0.0000 | |
| 111 | E | A | 0.0000 | |
| 112 | N | A | 0.1756 | |
| 113 | A | A | 0.3270 | |
| 114 | F | A | 0.0000 | |
| 115 | P | A | -0.2396 | |
| 116 | D | A | -1.1703 | |
| 117 | V | A | -1.5838 | |
| 118 | D | A | -2.7916 | |
| 119 | D | A | -2.9140 | |
| 120 | Q | A | -2.0378 | |
| 121 | P | A | -1.4872 | |
| 122 | S | A | -1.2284 | |
| 123 | W | A | 0.0000 | |
| 124 | L | A | 0.0000 | |
| 125 | S | A | 0.0000 | |
| 126 | L | A | 0.0000 | |
| 127 | A | A | 0.0000 | |
| 128 | Q | A | 0.0000 | |
| 129 | G | A | 0.0000 | |
| 130 | V | A | 0.0000 | |
| 131 | F | A | 0.0000 | |
| 132 | N | A | -0.5433 | |
| 133 | T | A | 0.0000 | |
| 134 | Q | A | 0.0000 | |
| 135 | A | A | -0.2278 | |
| 136 | S | A | -0.8088 | |
| 137 | R | A | -0.9895 | |
| 138 | W | A | -0.5186 | |
| 139 | D | A | -0.9588 | |
| 140 | Q | A | -1.4750 | |
| 141 | T | A | -0.9300 | |
| 142 | S | A | -1.5989 | |
| 143 | C | A | -1.3921 | |
| 144 | G | A | -0.9989 | |
| 145 | G | A | 0.0000 | |
| 146 | G | A | 0.0000 | |
| 147 | L | A | 0.0000 | |
| 148 | K | A | -0.0844 | |
| 149 | W | A | 0.1513 | |
| 150 | Q | A | 0.0000 | |
| 151 | I | A | 0.0000 | |
| 152 | F | A | 0.0000 | |
| 153 | T | A | 0.0487 | |
| 154 | F | A | 1.4021 | |
| 155 | N | A | 0.0000 | |
| 156 | N | A | -0.8238 | |
| 157 | G | A | -0.3849 | |
| 158 | Y | A | 0.0719 | |
| 159 | N | A | -1.2575 | |
| 160 | Y | A | -0.4509 | |
| 161 | K | A | 0.0000 | |
| 162 | N | A | 0.0000 | |
| 163 | T | A | 0.0000 | |
| 164 | I | A | 0.0000 | |
| 165 | S | A | 0.0000 | |
| 166 | N | A | 0.0000 | |
| 167 | G | A | 0.0000 | |
| 168 | C | A | 0.0000 | |
| 169 | F | A | 0.0000 | |
| 170 | F | A | 0.0000 | |
| 171 | N | A | 0.0000 | |
| 172 | I | A | 0.0000 | |
| 173 | A | A | 0.0000 | |
| 174 | S | A | 0.0000 | |
| 175 | R | A | 0.0000 | |
| 176 | L | A | 0.0000 | |
| 177 | Y | A | -0.5612 | |
| 178 | K | A | -0.7037 | |
| 179 | Y | A | 0.0000 | |
| 180 | T | A | -1.0674 | |
| 181 | G | A | -1.3023 | |
| 182 | N | A | -1.5094 | |
| 183 | E | A | -2.0527 | |
| 184 | T | A | -0.9877 | |
| 185 | Y | A | 0.0000 | |
| 186 | I | A | -0.7184 | |
| 187 | T | A | -0.8458 | |
| 188 | W | A | -0.7361 | |
| 189 | A | A | 0.0000 | |
| 190 | E | A | -1.3333 | |
| 191 | R | A | -1.7962 | |
| 192 | A | A | 0.0000 | |
| 193 | W | A | 0.0000 | |
| 194 | E | A | -1.6224 | |
| 195 | W | A | 0.0000 | |
| 196 | E | A | 0.0000 | |
| 197 | L | A | -0.1346 | |
| 198 | A | A | -0.1796 | |
| 199 | V | A | -0.2300 | |
| 200 | G | A | -0.5918 | |
| 201 | L | A | 0.0000 | |
| 202 | M | A | 0.0000 | |
| 203 | S | A | -1.1007 | |
| 204 | Q | A | -2.0205 | |
| 205 | D | A | -2.5958 | |
| 206 | Y | A | -1.3243 | |
| 207 | H | A | -1.3165 | |
| 208 | Y | A | 0.0000 | |
| 209 | F | A | 0.0000 | |
| 210 | D | A | -0.4998 | |
| 211 | G | A | 0.0000 | |
| 212 | T | A | 0.0000 | |
| 213 | D | A | -2.1189 | |
| 214 | D | A | 0.0000 | |
| 215 | R | A | -3.2757 | |
| 216 | K | A | -3.7821 | |
| 217 | N | A | -3.1144 | |
| 218 | C | A | 0.0000 | |
| 219 | S | A | -2.0822 | |
| 220 | D | A | -2.6362 | |
| 221 | V | A | -1.1984 | |
| 222 | N | A | -1.4291 | |
| 223 | R | A | -1.7891 | |
| 224 | I | A | 0.0386 | |
| 225 | Q | A | -0.1412 | |
| 226 | W | A | 0.0000 | |
| 227 | T | A | 0.0000 | |
| 228 | Y | A | 0.0000 | |
| 229 | N | A | 0.0000 | |
| 230 | A | A | 0.0000 | |
| 231 | G | A | 0.0000 | |
| 232 | V | A | 0.0000 | |
| 233 | H | A | 0.0000 | |
| 234 | M | A | 0.0000 | |
| 235 | A | A | 0.0000 | |
| 236 | G | A | 0.0000 | |
| 237 | A | A | 0.0000 | |
| 238 | A | A | 0.0000 | |
| 239 | A | A | 0.0000 | |
| 240 | L | A | 0.0000 | |
| 241 | W | A | -1.2628 | |
| 242 | N | A | -1.1173 | |
| 243 | A | A | -0.6167 | |
| 244 | T | A | -0.8383 | |
| 245 | G | A | -1.4778 | |
| 246 | D | A | -2.0849 | |
| 247 | E | A | -2.5738 | |
| 248 | V | A | -0.8710 | |
| 249 | W | A | 0.0000 | |
| 250 | R | A | -2.1846 | |
| 251 | E | A | -2.2414 | |
| 252 | R | A | -1.4814 | |
| 253 | L | A | 0.0000 | |
| 254 | L | A | -0.4192 | |
| 255 | G | A | -1.3886 | |
| 256 | I | A | 0.0000 | |
| 257 | I | A | 0.0000 | |
| 258 | N | A | -1.8197 | |
| 259 | G | A | 0.0000 | |
| 260 | T | A | 0.0000 | |
| 261 | D | A | -2.1388 | |
| 262 | I | A | -0.5406 | |
| 263 | F | A | 0.0000 | |
| 264 | F | A | -0.9463 | |
| 265 | S | A | -1.5886 | |
| 266 | K | A | -2.8487 | |
| 267 | D | A | -2.9484 | |
| 268 | A | A | -1.9378 | |
| 269 | P | A | -1.5846 | |
| 270 | N | A | -1.3836 | |
| 271 | V | A | 0.0000 | |
| 272 | M | A | 0.0000 | |
| 273 | F | A | 0.1571 | |
| 274 | E | A | 0.0000 | |
| 275 | V | A | 0.3791 | |
| 276 | A | A | -0.2377 | |
| 277 | C | A | 0.0000 | |
| 278 | E | A | 0.0000 | |
| 279 | Q | A | -2.1525 | |
| 280 | N | A | -2.4909 | |
| 281 | G | A | -2.4794 | |
| 282 | K | A | -2.7890 | |
| 283 | C | A | -1.8892 | |
| 284 | D | A | -1.8221 | |
| 285 | V | A | -0.4662 | |
| 286 | D | A | -0.4940 | |
| 287 | Q | A | -0.9394 | |
| 288 | R | A | -0.6394 | |
| 289 | S | A | 0.0000 | |
| 290 | F | A | 0.0000 | |
| 291 | K | A | 0.0000 | |
| 292 | A | A | 0.0000 | |
| 293 | Y | A | 0.0000 | |
| 294 | L | A | 0.0000 | |
| 295 | S | A | 0.0000 | |
| 296 | R | A | 0.0000 | |
| 297 | W | A | 0.0000 | |
| 298 | M | A | 0.0000 | |
| 299 | G | A | 0.0000 | |
| 300 | Y | A | -0.0084 | |
| 301 | T | A | 0.0000 | |
| 302 | A | A | 0.0000 | |
| 303 | K | A | -0.8407 | |
| 304 | V | A | 0.0000 | |
| 305 | A | A | 0.0000 | |
| 306 | P | A | -0.7137 | |
| 307 | F | A | -0.2799 | |
| 308 | T | A | 0.0000 | |
| 309 | R | A | -1.4445 | |
| 310 | E | A | -2.0352 | |
| 311 | A | A | -1.1088 | |
| 312 | I | A | 0.0000 | |
| 313 | M | A | -0.7543 | |
| 314 | T | A | -0.7883 | |
| 315 | R | A | -0.7923 | |
| 316 | L | A | 0.0000 | |
| 317 | S | A | -0.3460 | |
| 318 | A | A | -0.3861 | |
| 319 | S | A | 0.0000 | |
| 320 | A | A | 0.0000 | |
| 321 | Q | A | -1.4364 | |
| 322 | A | A | -1.0057 | |
| 323 | A | A | 0.0000 | |
| 324 | A | A | 0.0000 | |
| 325 | K | A | -1.7216 | |
| 326 | Q | A | 0.0000 | |
| 327 | C | A | 0.0000 | |
| 328 | N | A | -1.3846 | |
| 329 | A | A | -1.2660 | |
| 330 | G | A | -1.7758 | |
| 331 | E | A | -2.7432 | |
| 332 | D | A | -2.4509 | |
| 333 | Q | A | -2.4945 | |
| 334 | Q | A | -1.9210 | |
| 335 | T | A | -0.9213 | |
| 336 | C | A | 0.0000 | |
| 337 | G | A | 0.0000 | |
| 338 | L | A | 0.0000 | |
| 339 | R | A | -1.0680 | |
| 340 | W | A | 0.0000 | |
| 341 | T | A | -1.3851 | |
| 342 | N | A | -1.4540 | |
| 343 | N | A | -1.7086 | |
| 344 | G | A | -0.7829 | |
| 345 | V | A | 0.4752 | |
| 346 | N | A | -0.3334 | |
| 347 | D | A | -0.6599 | |
| 348 | G | A | -0.4074 | |
| 349 | S | A | -0.0108 | |
| 350 | F | A | 1.0368 | |
| 351 | G | A | 0.0000 | |
| 352 | V | A | 0.0000 | |
| 353 | G | A | 0.0000 | |
| 354 | E | A | 0.0000 | |
| 355 | Q | A | 0.0000 | |
| 356 | M | A | 0.0000 | |
| 357 | A | A | 0.0000 | |
| 358 | A | A | 0.0000 | |
| 359 | M | A | 0.0000 | |
| 360 | E | A | 0.0000 | |
| 361 | V | A | 0.0000 | |
| 362 | M | A | 0.0000 | |
| 363 | Q | A | 0.0000 | |
| 364 | S | A | 0.0000 | |
| 365 | L | A | 0.0000 | |
| 366 | L | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | D | A | -2.3152 | |
| 369 | Q | A | -1.8780 | |
| 370 | V | A | -0.9281 | |
| 371 | A | A | -0.4388 | |
| 372 | G | A | -0.3882 | |
| 373 | P | A | -0.2696 | |
| 374 | V | A | -0.5578 | |
| 375 | T | A | -1.1579 | |
| 376 | E | A | -1.8892 | |
| 377 | T | A | -1.4382 | |
| 378 | K | A | -2.0645 | |
| 379 | G | A | -1.1057 | |
| 380 | G | A | -0.5894 | |
| 381 | I | A | 0.8349 | |
| 382 | S | A | 0.0000 | |
| 383 | K | A | -1.7461 | |
| 384 | S | A | -1.3090 | |
| 385 | D | A | -1.3886 | |
| 386 | P | A | -1.0361 | |
| 387 | S | A | -0.7597 | |
| 388 | A | A | 0.0000 | |
| 389 | G | A | 0.0000 | |
| 390 | S | A | -0.7622 | |
| 391 | G | A | -1.0442 | |
| 392 | A | A | -1.5287 | |
| 393 | Q | A | -2.4655 | |
| 394 | D | A | -3.0881 | |
| 395 | K | A | -2.2939 | |
| 396 | P | A | -0.6047 | |
| 397 | I | A | 0.9470 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine