Project name: query_structure

Status: done

Started: 2026-03-16 23:31:54
Settings
Chain sequence(s) A: GSIPCGESCVYIPCISAVLGCSCKNKVCYRN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:18)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:18)
Show buried residues

Minimal score value
-2.3131
Maximal score value
2.8678
Average score
0.2971
Total score value
9.2097

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.4464
2 S A -0.4296
3 I A 1.0384
4 P A 0.1390
5 C A 0.3320
6 G A -0.3453
7 E A 0.1502
8 S A 0.2968
9 C A 0.9315
10 V A 2.0741
11 Y A 2.3310
12 I A 1.9862
13 P A 1.3099
14 C A 0.0000
15 I A 2.6572
16 S A 1.8555
17 A A 1.7963
18 V A 2.8678
19 L A 2.3183
20 G A 0.4891
21 C A 0.0000
22 S A -0.5650
23 C A -0.6815
24 K A -2.3131
25 N A -2.2258
26 K A -1.5191
27 V A -0.9821
28 C A 0.0000
29 Y A -0.8974
30 R A -1.2727
31 N A -1.6856
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Laboratory of Theory of Biopolymers 2018