| Chain sequence(s) |
A: LPAPKNLVVSRVTEDSARLSWPLFASDLNIFDSFLIQYQESEKVGEAIVLTVPGSERSYDLTGLKPGTEYTVSIYGVGRHYTVYDSNPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:57)
[INFO] Main: Simulation completed successfully. (00:00:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.3996 | |
| 2 | P | A | 0.2676 | |
| 3 | A | A | -0.5064 | |
| 4 | P | A | -1.1437 | |
| 5 | K | A | -2.2262 | |
| 6 | N | A | -1.4788 | |
| 7 | L | A | 0.0000 | |
| 8 | V | A | 1.2540 | |
| 9 | V | A | 0.7305 | |
| 10 | S | A | -0.5961 | |
| 11 | R | A | -1.9867 | |
| 12 | V | A | -0.9837 | |
| 13 | T | A | -1.7764 | |
| 14 | E | A | -3.0628 | |
| 15 | D | A | -2.7626 | |
| 16 | S | A | -2.0746 | |
| 17 | A | A | 0.0000 | |
| 18 | R | A | -1.1155 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.0891 | |
| 21 | W | A | 0.0000 | |
| 22 | P | A | 0.3796 | |
| 23 | L | A | 1.8213 | |
| 24 | F | A | 1.4926 | |
| 25 | A | A | 0.9289 | |
| 26 | S | A | 0.5229 | |
| 27 | D | A | 0.7191 | |
| 28 | L | A | 1.3733 | |
| 29 | N | A | -0.6121 | |
| 30 | I | A | -0.2092 | |
| 31 | F | A | -0.6602 | |
| 32 | D | A | -2.2667 | |
| 33 | S | A | -0.9379 | |
| 34 | F | A | 0.0000 | |
| 35 | L | A | 0.6854 | |
| 36 | I | A | 0.0000 | |
| 37 | Q | A | 0.5071 | |
| 38 | Y | A | 0.4534 | |
| 39 | Q | A | -0.8219 | |
| 40 | E | A | -1.8418 | |
| 41 | S | A | -1.5926 | |
| 42 | E | A | -2.4392 | |
| 43 | K | A | -1.9459 | |
| 44 | V | A | 0.0267 | |
| 45 | G | A | -0.9380 | |
| 46 | E | A | -1.5502 | |
| 47 | A | A | -0.2067 | |
| 48 | I | A | 1.1632 | |
| 49 | V | A | 1.8179 | |
| 50 | L | A | 1.2779 | |
| 51 | T | A | 0.3742 | |
| 52 | V | A | 0.0000 | |
| 53 | P | A | -1.1419 | |
| 54 | G | A | -1.1909 | |
| 55 | S | A | -1.2181 | |
| 56 | E | A | -1.4104 | |
| 57 | R | A | -0.8234 | |
| 58 | S | A | -0.6650 | |
| 59 | Y | A | -0.6989 | |
| 60 | D | A | -1.5648 | |
| 61 | L | A | 0.0000 | |
| 62 | T | A | -1.3482 | |
| 63 | G | A | -1.5146 | |
| 64 | L | A | 0.0000 | |
| 65 | K | A | -3.0486 | |
| 66 | P | A | -2.5977 | |
| 67 | G | A | -1.8659 | |
| 68 | T | A | -2.2975 | |
| 69 | E | A | -1.9679 | |
| 70 | Y | A | 0.0000 | |
| 71 | T | A | -0.0020 | |
| 72 | V | A | 0.0000 | |
| 73 | S | A | -0.0100 | |
| 74 | I | A | 0.0000 | |
| 75 | Y | A | -0.2315 | |
| 76 | G | A | 0.0000 | |
| 77 | V | A | 0.0000 | |
| 78 | G | A | 0.0000 | |
| 79 | R | A | -2.2795 | |
| 80 | H | A | -1.3492 | |
| 81 | Y | A | 0.2474 | |
| 82 | T | A | 0.0372 | |
| 83 | V | A | 0.5405 | |
| 84 | Y | A | 0.0099 | |
| 85 | D | A | -1.8011 | |
| 86 | S | A | -1.4205 | |
| 87 | N | A | -2.0438 | |
| 88 | P | A | -1.3809 | |
| 89 | L | A | -0.9746 | |
| 90 | S | A | -0.0949 | |
| 91 | A | A | 0.9494 | |
| 92 | I | A | 1.8473 | |
| 93 | F | A | 0.0000 | |
| 94 | T | A | -0.8644 | |
| 95 | T | A | -1.9733 |