| Chain sequence(s) |
A: GIVEQCCEKICQLHHLGDYCNRNQQYQCNWKLVEALYLQCKFYGFFYTPKG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:06)
[INFO] Main: Simulation completed successfully. (00:01:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.7435 | |
| 2 | I | A | -0.6579 | |
| 3 | V | A | -0.9402 | |
| 4 | E | A | -2.2037 | |
| 5 | Q | A | -1.2139 | |
| 6 | C | A | 0.0000 | |
| 7 | C | A | 0.0000 | |
| 8 | E | A | -2.1136 | |
| 9 | K | A | -1.3871 | |
| 10 | I | A | 1.2265 | |
| 11 | C | A | 0.0000 | |
| 12 | Q | A | -0.3321 | |
| 13 | L | A | -0.3131 | |
| 14 | H | A | -1.3979 | |
| 15 | H | A | -0.9038 | |
| 16 | L | A | 0.0000 | |
| 17 | G | A | -1.4962 | |
| 18 | D | A | -1.8296 | |
| 19 | Y | A | -0.2947 | |
| 20 | C | A | -1.8830 | |
| 21 | N | A | -2.8874 | |
| 22 | R | A | -3.6207 | |
| 23 | N | A | -3.2960 | |
| 24 | Q | A | -3.0017 | |
| 25 | Q | A | -2.5681 | |
| 26 | Y | A | -0.6255 | |
| 27 | Q | A | -1.3002 | |
| 28 | C | A | -1.3611 | |
| 29 | N | A | -0.5563 | |
| 30 | W | A | -0.0837 | |
| 31 | K | A | -1.3359 | |
| 32 | L | A | 0.1038 | |
| 33 | V | A | 0.4639 | |
| 34 | E | A | -0.3511 | |
| 35 | A | A | -0.1270 | |
| 36 | L | A | 0.0000 | |
| 37 | Y | A | 1.4023 | |
| 38 | L | A | 1.1222 | |
| 39 | Q | A | -0.1139 | |
| 40 | C | A | 0.0000 | |
| 41 | K | A | 0.0975 | |
| 42 | F | A | 1.9679 | |
| 43 | Y | A | 1.5732 | |
| 44 | G | A | 1.2137 | |
| 45 | F | A | 1.4259 | |
| 46 | F | A | 1.9929 | |
| 47 | Y | A | 1.6385 | |
| 48 | T | A | 0.2509 | |
| 49 | P | A | -0.7022 | |
| 50 | K | A | -1.8844 | |
| 51 | G | A | -1.1075 |