Project name: GSGGSGSGGS

Status: done

Started: 2025-11-18 02:00:42
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Chain sequence(s) A: GSGGSGSGGSEVQLVESGGGLVQPGGSLRLSCAASLEHVAIGWFRQAPGKEREGVSCISSSGGHIHYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAAVSYWECYDKLDYWGQGTLVTVSSPP
input PDB
Selected Chain(s) A
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:37)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:38)
Show buried residues

Minimal score value
-2.3386
Maximal score value
1.7728
Average score
-0.3266
Total score value
-42.7908

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.5060
2 S A -0.3882
3 G A -0.5939
4 G A -0.5922
5 S A -0.3826
6 G A -0.5439
7 S A -0.3824
8 G A -0.5912
9 G A -0.5913
10 S A -0.6293
11 E A -1.8256
12 V A -0.3636
13 Q A -1.1646
14 L A 0.0000
15 V A 1.7728
16 E A 0.0000
17 S A -0.2026
18 G A -0.3481
19 G A -0.2721
20 G A 0.0620
21 L A 1.5103
22 V A 0.0000
23 Q A -1.2227
24 P A -0.4348
25 G A -0.5252
26 G A -0.1646
27 S A -0.1685
28 L A -0.1236
29 R A -1.8533
30 L A 0.0000
31 S A -0.0125
32 C A 0.0000
33 A A 0.0254
34 A A -0.0286
35 S A -0.0860
36 L A 0.3301
37 E A -1.8492
38 H A -1.1990
39 V A 0.0000
40 A A 0.0000
41 I A 0.0000
42 G A 0.0000
43 W A 0.0000
44 F A 0.2068
45 R A 0.0000
46 Q A -0.5357
47 A A -0.1069
48 P A -0.3370
49 G A -0.8143
50 K A -2.1210
51 E A -2.3386
52 R A -1.6985
53 E A -1.3789
54 G A -0.3031
55 V A 0.0000
56 S A 0.0000
57 C A 0.0000
58 I A 0.0000
59 S A 0.0000
60 S A 0.0000
61 S A -0.2388
62 G A -0.2653
63 G A -0.6706
64 H A -0.8952
65 I A 0.6463
66 H A -0.5744
67 Y A 0.1357
68 A A -0.2596
69 D A -1.8178
70 S A -0.4919
71 V A 0.0000
72 K A -1.7844
73 G A -0.8304
74 R A -0.4013
75 F A 0.0000
76 T A -0.0453
77 I A 0.0000
78 S A -0.1636
79 R A -0.4064
80 D A -0.8087
81 N A -1.4297
82 S A -0.7468
83 K A -1.7759
84 N A -0.6560
85 T A 0.0000
86 V A 0.0000
87 Y A 0.1475
88 L A 0.0000
89 Q A -0.6457
90 M A 0.0000
91 N A -0.5422
92 S A -0.3194
93 L A 0.0000
94 R A -1.1312
95 A A -0.4721
96 E A -1.8095
97 D A 0.0000
98 T A -0.0181
99 A A 0.0000
100 V A 0.5577
101 Y A 0.0000
102 Y A 0.2069
103 C A 0.0000
104 A A 0.0000
105 A A 0.0000
106 A A 0.0000
107 V A 1.6031
108 S A 0.3639
109 Y A 0.9393
110 W A 1.0845
111 E A -1.0639
112 C A -0.0632
113 Y A 0.2582
114 D A -1.6736
115 K A -1.9237
116 L A -0.4401
117 D A -1.6921
118 Y A 0.0906
119 W A 0.4655
120 G A -0.1983
121 Q A -1.2086
122 G A 0.0000
123 T A 0.2745
124 L A 1.5934
125 V A 0.0000
126 T A 0.1585
127 V A 0.0000
128 S A -0.1580
129 S A -0.2812
130 P A -0.3400
131 P A -0.3012
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Laboratory of Theory of Biopolymers 2018