| Chain sequence(s) |
A: GSGGSGSGGSEVQLVESGGGLVQPGGSLRLSCAASLEHVAIGWFRQAPGKEREGVSCISSSGGHIHYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAAVSYWECYDKLDYWGQGTLVTVSSPP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:37)
[INFO] Main: Simulation completed successfully. (00:01:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.5060 | |
| 2 | S | A | -0.3882 | |
| 3 | G | A | -0.5939 | |
| 4 | G | A | -0.5922 | |
| 5 | S | A | -0.3826 | |
| 6 | G | A | -0.5439 | |
| 7 | S | A | -0.3824 | |
| 8 | G | A | -0.5912 | |
| 9 | G | A | -0.5913 | |
| 10 | S | A | -0.6293 | |
| 11 | E | A | -1.8256 | |
| 12 | V | A | -0.3636 | |
| 13 | Q | A | -1.1646 | |
| 14 | L | A | 0.0000 | |
| 15 | V | A | 1.7728 | |
| 16 | E | A | 0.0000 | |
| 17 | S | A | -0.2026 | |
| 18 | G | A | -0.3481 | |
| 19 | G | A | -0.2721 | |
| 20 | G | A | 0.0620 | |
| 21 | L | A | 1.5103 | |
| 22 | V | A | 0.0000 | |
| 23 | Q | A | -1.2227 | |
| 24 | P | A | -0.4348 | |
| 25 | G | A | -0.5252 | |
| 26 | G | A | -0.1646 | |
| 27 | S | A | -0.1685 | |
| 28 | L | A | -0.1236 | |
| 29 | R | A | -1.8533 | |
| 30 | L | A | 0.0000 | |
| 31 | S | A | -0.0125 | |
| 32 | C | A | 0.0000 | |
| 33 | A | A | 0.0254 | |
| 34 | A | A | -0.0286 | |
| 35 | S | A | -0.0860 | |
| 36 | L | A | 0.3301 | |
| 37 | E | A | -1.8492 | |
| 38 | H | A | -1.1990 | |
| 39 | V | A | 0.0000 | |
| 40 | A | A | 0.0000 | |
| 41 | I | A | 0.0000 | |
| 42 | G | A | 0.0000 | |
| 43 | W | A | 0.0000 | |
| 44 | F | A | 0.2068 | |
| 45 | R | A | 0.0000 | |
| 46 | Q | A | -0.5357 | |
| 47 | A | A | -0.1069 | |
| 48 | P | A | -0.3370 | |
| 49 | G | A | -0.8143 | |
| 50 | K | A | -2.1210 | |
| 51 | E | A | -2.3386 | |
| 52 | R | A | -1.6985 | |
| 53 | E | A | -1.3789 | |
| 54 | G | A | -0.3031 | |
| 55 | V | A | 0.0000 | |
| 56 | S | A | 0.0000 | |
| 57 | C | A | 0.0000 | |
| 58 | I | A | 0.0000 | |
| 59 | S | A | 0.0000 | |
| 60 | S | A | 0.0000 | |
| 61 | S | A | -0.2388 | |
| 62 | G | A | -0.2653 | |
| 63 | G | A | -0.6706 | |
| 64 | H | A | -0.8952 | |
| 65 | I | A | 0.6463 | |
| 66 | H | A | -0.5744 | |
| 67 | Y | A | 0.1357 | |
| 68 | A | A | -0.2596 | |
| 69 | D | A | -1.8178 | |
| 70 | S | A | -0.4919 | |
| 71 | V | A | 0.0000 | |
| 72 | K | A | -1.7844 | |
| 73 | G | A | -0.8304 | |
| 74 | R | A | -0.4013 | |
| 75 | F | A | 0.0000 | |
| 76 | T | A | -0.0453 | |
| 77 | I | A | 0.0000 | |
| 78 | S | A | -0.1636 | |
| 79 | R | A | -0.4064 | |
| 80 | D | A | -0.8087 | |
| 81 | N | A | -1.4297 | |
| 82 | S | A | -0.7468 | |
| 83 | K | A | -1.7759 | |
| 84 | N | A | -0.6560 | |
| 85 | T | A | 0.0000 | |
| 86 | V | A | 0.0000 | |
| 87 | Y | A | 0.1475 | |
| 88 | L | A | 0.0000 | |
| 89 | Q | A | -0.6457 | |
| 90 | M | A | 0.0000 | |
| 91 | N | A | -0.5422 | |
| 92 | S | A | -0.3194 | |
| 93 | L | A | 0.0000 | |
| 94 | R | A | -1.1312 | |
| 95 | A | A | -0.4721 | |
| 96 | E | A | -1.8095 | |
| 97 | D | A | 0.0000 | |
| 98 | T | A | -0.0181 | |
| 99 | A | A | 0.0000 | |
| 100 | V | A | 0.5577 | |
| 101 | Y | A | 0.0000 | |
| 102 | Y | A | 0.2069 | |
| 103 | C | A | 0.0000 | |
| 104 | A | A | 0.0000 | |
| 105 | A | A | 0.0000 | |
| 106 | A | A | 0.0000 | |
| 107 | V | A | 1.6031 | |
| 108 | S | A | 0.3639 | |
| 109 | Y | A | 0.9393 | |
| 110 | W | A | 1.0845 | |
| 111 | E | A | -1.0639 | |
| 112 | C | A | -0.0632 | |
| 113 | Y | A | 0.2582 | |
| 114 | D | A | -1.6736 | |
| 115 | K | A | -1.9237 | |
| 116 | L | A | -0.4401 | |
| 117 | D | A | -1.6921 | |
| 118 | Y | A | 0.0906 | |
| 119 | W | A | 0.4655 | |
| 120 | G | A | -0.1983 | |
| 121 | Q | A | -1.2086 | |
| 122 | G | A | 0.0000 | |
| 123 | T | A | 0.2745 | |
| 124 | L | A | 1.5934 | |
| 125 | V | A | 0.0000 | |
| 126 | T | A | 0.1585 | |
| 127 | V | A | 0.0000 | |
| 128 | S | A | -0.1580 | |
| 129 | S | A | -0.2812 | |
| 130 | P | A | -0.3400 | |
| 131 | P | A | -0.3012 |