| Chain sequence(s) |
A: MKITKDILITGTGCTTDRAIKWLDDVQAAMDKFHIESPRAIAAYLANIGVESGGLVSLVENLNYSAQGLANTWPRRYAVDPRVRPYVPNALAKRLARNPVAIANNVYADRMGNGCEQDGDGWKYRGRGLIQLTGKSNYSLFAEDSGMDVLEKPELLETPAGASMSSAWFFWRNRCIPMAESNNFSMVVKTINGAAPNDANHGQLRINRYMKTIAAINQGS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:17)
[INFO] Main: Simulation completed successfully. (00:01:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.2443 | |
| 2 | K | A | -1.3773 | |
| 3 | I | A | -1.2316 | |
| 4 | T | A | -1.5113 | |
| 5 | K | A | -2.1312 | |
| 6 | D | A | -1.6823 | |
| 7 | I | A | -1.0121 | |
| 8 | L | A | 0.0000 | |
| 9 | I | A | -0.6829 | |
| 10 | T | A | -0.7909 | |
| 11 | G | A | 0.0000 | |
| 12 | T | A | 0.0000 | |
| 13 | G | A | -0.6311 | |
| 14 | C | A | -0.1976 | |
| 15 | T | A | -0.6457 | |
| 16 | T | A | -1.1549 | |
| 17 | D | A | -1.6883 | |
| 18 | R | A | -1.6762 | |
| 19 | A | A | 0.0000 | |
| 20 | I | A | -0.5588 | |
| 21 | K | A | -2.1370 | |
| 22 | W | A | 0.0000 | |
| 23 | L | A | 0.0000 | |
| 24 | D | A | -2.1093 | |
| 25 | D | A | 0.0000 | |
| 26 | V | A | 0.0000 | |
| 27 | Q | A | -1.9031 | |
| 28 | A | A | -1.5534 | |
| 29 | A | A | 0.0000 | |
| 30 | M | A | 0.0000 | |
| 31 | D | A | -2.8286 | |
| 32 | K | A | -2.2228 | |
| 33 | F | A | 0.0000 | |
| 34 | H | A | -2.2589 | |
| 35 | I | A | 0.0000 | |
| 36 | E | A | -2.7680 | |
| 37 | S | A | -1.5008 | |
| 38 | P | A | -1.4535 | |
| 39 | R | A | -1.7347 | |
| 40 | A | A | 0.0000 | |
| 41 | I | A | 0.0000 | |
| 42 | A | A | 0.0000 | |
| 43 | A | A | 0.0000 | |
| 44 | Y | A | 0.0000 | |
| 45 | L | A | 0.0000 | |
| 46 | A | A | 0.0000 | |
| 47 | N | A | 0.0000 | |
| 48 | I | A | 0.0000 | |
| 49 | G | A | 0.0000 | |
| 50 | V | A | -0.0531 | |
| 51 | E | A | -0.3421 | |
| 52 | S | A | 0.0000 | |
| 53 | G | A | 0.0797 | |
| 54 | G | A | 0.0924 | |
| 55 | L | A | 0.5941 | |
| 56 | V | A | 1.5459 | |
| 57 | S | A | 0.6987 | |
| 58 | L | A | 0.4940 | |
| 59 | V | A | 0.3336 | |
| 60 | E | A | -0.5431 | |
| 61 | N | A | -1.1335 | |
| 62 | L | A | 0.0000 | |
| 63 | N | A | -1.5976 | |
| 64 | Y | A | -0.8268 | |
| 65 | S | A | -1.3206 | |
| 66 | A | A | -1.8107 | |
| 67 | Q | A | -1.9168 | |
| 68 | G | A | -1.2968 | |
| 69 | L | A | 0.0000 | |
| 70 | A | A | -1.2487 | |
| 71 | N | A | -1.9826 | |
| 72 | T | A | -1.1661 | |
| 73 | W | A | -0.7395 | |
| 74 | P | A | -1.3020 | |
| 75 | R | A | -2.0377 | |
| 76 | R | A | -2.0381 | |
| 77 | Y | A | -1.0993 | |
| 78 | A | A | 0.0000 | |
| 79 | V | A | 0.3032 | |
| 80 | D | A | -0.5804 | |
| 81 | P | A | -1.2922 | |
| 82 | R | A | -2.1504 | |
| 83 | V | A | 0.0000 | |
| 84 | R | A | -2.6076 | |
| 85 | P | A | -1.7578 | |
| 86 | Y | A | -0.9927 | |
| 87 | V | A | 0.0000 | |
| 88 | P | A | -1.2198 | |
| 89 | N | A | -1.5639 | |
| 90 | A | A | -0.2520 | |
| 91 | L | A | 0.4906 | |
| 92 | A | A | -0.8337 | |
| 93 | K | A | -2.0945 | |
| 94 | R | A | -2.4852 | |
| 95 | L | A | -1.1090 | |
| 96 | A | A | -1.2852 | |
| 97 | R | A | -1.8421 | |
| 98 | N | A | -1.1745 | |
| 99 | P | A | 0.0000 | |
| 100 | V | A | -0.7998 | |
| 101 | A | A | -0.9755 | |
| 102 | I | A | 0.0000 | |
| 103 | A | A | 0.0000 | |
| 104 | N | A | -1.2385 | |
| 105 | N | A | -1.3928 | |
| 106 | V | A | 0.0000 | |
| 107 | Y | A | -0.4526 | |
| 108 | A | A | -1.8257 | |
| 109 | D | A | -2.4035 | |
| 110 | R | A | -0.9874 | |
| 111 | M | A | 0.2972 | |
| 112 | G | A | -0.6714 | |
| 113 | N | A | 0.0000 | |
| 114 | G | A | -1.7351 | |
| 115 | C | A | -2.1564 | |
| 116 | E | A | -3.1188 | |
| 117 | Q | A | -2.9179 | |
| 118 | D | A | -2.7806 | |
| 119 | G | A | -1.5699 | |
| 120 | D | A | 0.0000 | |
| 121 | G | A | 0.0000 | |
| 122 | W | A | -0.2523 | |
| 123 | K | A | -1.0998 | |
| 124 | Y | A | 0.0000 | |
| 125 | R | A | 0.0000 | |
| 126 | G | A | 0.0000 | |
| 127 | R | A | 0.0000 | |
| 128 | G | A | 0.0000 | |
| 129 | L | A | 0.0000 | |
| 130 | I | A | 0.0000 | |
| 131 | Q | A | -0.8015 | |
| 132 | L | A | 0.0000 | |
| 133 | T | A | -0.3622 | |
| 134 | G | A | 0.0000 | |
| 135 | K | A | -1.1226 | |
| 136 | S | A | -0.6353 | |
| 137 | N | A | -0.9962 | |
| 138 | Y | A | 0.0000 | |
| 139 | S | A | -0.9495 | |
| 140 | L | A | -0.3179 | |
| 141 | F | A | 0.0000 | |
| 142 | A | A | -1.7482 | |
| 143 | E | A | -2.2038 | |
| 144 | D | A | -1.2780 | |
| 145 | S | A | -1.0016 | |
| 146 | G | A | -1.3636 | |
| 147 | M | A | -1.4621 | |
| 148 | D | A | -2.5142 | |
| 149 | V | A | 0.0000 | |
| 150 | L | A | -1.7468 | |
| 151 | E | A | -2.8528 | |
| 152 | K | A | -2.7991 | |
| 153 | P | A | 0.0000 | |
| 154 | E | A | -2.1276 | |
| 155 | L | A | -1.1135 | |
| 156 | L | A | 0.0000 | |
| 157 | E | A | -0.8556 | |
| 158 | T | A | -0.4157 | |
| 159 | P | A | -0.4830 | |
| 160 | A | A | -0.4040 | |
| 161 | G | A | 0.0000 | |
| 162 | A | A | 0.0000 | |
| 163 | S | A | 0.0000 | |
| 164 | M | A | -0.1188 | |
| 165 | S | A | 0.0000 | |
| 166 | S | A | 0.0000 | |
| 167 | A | A | 0.0000 | |
| 168 | W | A | -0.2093 | |
| 169 | F | A | 0.0132 | |
| 170 | F | A | 0.0000 | |
| 171 | W | A | -0.4996 | |
| 172 | R | A | -1.4616 | |
| 173 | N | A | -1.2088 | |
| 174 | R | A | -1.9540 | |
| 175 | C | A | 0.0000 | |
| 176 | I | A | -1.1833 | |
| 177 | P | A | -0.8584 | |
| 178 | M | A | -0.6702 | |
| 179 | A | A | -1.1549 | |
| 180 | E | A | -1.7909 | |
| 181 | S | A | 0.0000 | |
| 182 | N | A | -1.9351 | |
| 183 | N | A | -1.5821 | |
| 184 | F | A | 0.0000 | |
| 185 | S | A | -0.9462 | |
| 186 | M | A | -1.0719 | |
| 187 | V | A | 0.0000 | |
| 188 | V | A | 0.0000 | |
| 189 | K | A | -1.9211 | |
| 190 | T | A | -1.3012 | |
| 191 | I | A | -0.8470 | |
| 192 | N | A | -1.2678 | |
| 193 | G | A | -1.2542 | |
| 194 | A | A | -1.1485 | |
| 195 | A | A | -1.5447 | |
| 196 | P | A | 0.0000 | |
| 197 | N | A | -2.5357 | |
| 198 | D | A | -3.1228 | |
| 199 | A | A | -2.0616 | |
| 200 | N | A | -2.3033 | |
| 201 | H | A | -1.8493 | |
| 202 | G | A | -1.4571 | |
| 203 | Q | A | -1.2356 | |
| 204 | L | A | -0.1004 | |
| 205 | R | A | 0.0000 | |
| 206 | I | A | 0.0105 | |
| 207 | N | A | -0.9288 | |
| 208 | R | A | -0.7103 | |
| 209 | Y | A | 0.0000 | |
| 210 | M | A | -0.1330 | |
| 211 | K | A | -1.3051 | |
| 212 | T | A | 0.0000 | |
| 213 | I | A | -0.6510 | |
| 214 | A | A | -0.6181 | |
| 215 | A | A | -0.8163 | |
| 216 | I | A | 0.0000 | |
| 217 | N | A | -1.7385 | |
| 218 | Q | A | -1.8004 | |
| 219 | G | A | -1.2604 | |
| 220 | S | A | -1.2187 |