| Chain sequence(s) |
B: MRALIDKAKSLLEAVKKLSEVEELITGDKEKLEEKRKKLKEKVEKIVKLG
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:02)
[INFO] Main: Simulation completed successfully. (00:03:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | B | 0.1244 | |
| 2 | R | B | -1.8231 | |
| 3 | A | B | -1.3911 | |
| 4 | L | B | -0.7181 | |
| 5 | I | B | -1.7014 | |
| 6 | D | B | -3.1149 | |
| 7 | K | B | -2.8699 | |
| 8 | A | B | 0.0000 | |
| 9 | K | B | -2.8330 | |
| 10 | S | B | -2.3482 | |
| 11 | L | B | -1.9627 | |
| 12 | L | B | -2.6001 | |
| 13 | E | B | -2.9342 | |
| 14 | A | B | -1.7465 | |
| 15 | V | B | 0.0000 | |
| 16 | K | B | -2.5860 | |
| 17 | K | B | -2.3339 | |
| 18 | L | B | -0.6246 | |
| 19 | S | B | -1.7601 | |
| 20 | E | B | -1.9340 | |
| 21 | V | B | 0.1123 | |
| 22 | E | B | 0.0000 | |
| 23 | E | B | -1.1957 | |
| 24 | L | B | 0.7162 | |
| 25 | I | B | 0.1099 | |
| 26 | T | B | -0.4498 | |
| 27 | G | B | -1.6201 | |
| 28 | D | B | -3.3901 | |
| 29 | K | B | -3.5689 | |
| 30 | E | B | -4.3130 | |
| 31 | K | B | -4.0902 | |
| 32 | L | B | -3.2404 | |
| 33 | E | B | -4.2742 | |
| 34 | E | B | -4.4780 | |
| 35 | K | B | -4.4728 | |
| 36 | R | B | -3.9459 | |
| 37 | K | B | -4.6688 | |
| 38 | K | B | -4.7828 | |
| 39 | L | B | -3.4727 | |
| 40 | K | B | -4.3518 | |
| 41 | E | B | -4.7709 | |
| 42 | K | B | -4.0139 | |
| 43 | V | B | 0.0000 | |
| 44 | E | B | -3.6309 | |
| 45 | K | B | -3.1874 | |
| 46 | I | B | -1.5460 | |
| 47 | V | B | -2.0912 | |
| 48 | K | B | -1.8302 | |
| 49 | L | B | 0.2761 | |
| 50 | G | B | -0.4592 |