| Chain sequence(s) |
H: QAYLQQSGAELVRPGASVKMSCKASGYTFTSYNMHWVKQTPRQGLEWIGGIYPGNGDTSYNQKFKGKATLTVGKSSSTAYMQLSSLTSEDSAVYFCARYDYNYAMDYWGQGTSVTVSS
L: QIVLSQSPAILSASPGEKVTMTCRASSSVSYMHWYQQKPGSSPKPWIYATSNLASGVPARFSGSGSGTSYSFTISRVEAEDAATYYCQQWTFNPPTFGGGTRLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:38)
[INFO] Main: Simulation completed successfully. (00:01:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -0.9733 | |
| 2 | A | H | -0.2120 | |
| 3 | Y | H | 0.4101 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.4386 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.9540 | |
| 8 | G | H | -0.8213 | |
| 9 | A | H | 0.1061 | |
| 11 | E | H | 0.1688 | |
| 12 | L | H | 1.1147 | |
| 13 | V | H | -0.1140 | |
| 14 | R | H | -1.7842 | |
| 15 | P | H | -1.3088 | |
| 16 | G | H | -1.1521 | |
| 17 | A | H | -0.8540 | |
| 18 | S | H | -0.8851 | |
| 19 | V | H | -0.6249 | |
| 20 | K | H | -1.3621 | |
| 21 | M | H | 0.0000 | |
| 22 | S | H | -0.7297 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -1.0628 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.5191 | |
| 27 | G | H | -0.5319 | |
| 28 | Y | H | -0.0852 | |
| 29 | T | H | -0.1935 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -0.4521 | |
| 36 | S | H | 0.0103 | |
| 37 | Y | H | 0.3250 | |
| 38 | N | H | -0.1142 | |
| 39 | M | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | K | H | 0.0000 | |
| 44 | Q | H | -0.5526 | |
| 45 | T | H | 0.0000 | |
| 46 | P | H | -1.3281 | |
| 47 | R | H | -2.3021 | |
| 48 | Q | H | -1.6710 | |
| 49 | G | H | -1.1511 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.6663 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | G | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | -0.5373 | |
| 58 | P | H | 0.0000 | |
| 59 | G | H | -1.1152 | |
| 62 | N | H | -1.8894 | |
| 63 | G | H | -1.6107 | |
| 64 | D | H | -2.1364 | |
| 65 | T | H | -1.0144 | |
| 66 | S | H | -0.8549 | |
| 67 | Y | H | -1.0846 | |
| 68 | N | H | 0.0000 | |
| 69 | Q | H | -2.6989 | |
| 70 | K | H | -2.8387 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -2.8133 | |
| 74 | G | H | -1.8701 | |
| 75 | K | H | -1.6298 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.7922 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.3353 | |
| 80 | V | H | -0.4687 | |
| 81 | G | H | -0.6251 | |
| 82 | K | H | -1.2476 | |
| 83 | S | H | -0.7169 | |
| 84 | S | H | -0.6880 | |
| 85 | S | H | -0.7968 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.2280 | |
| 89 | M | H | 0.0000 | |
| 90 | Q | H | -1.0674 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -0.7721 | |
| 93 | S | H | -0.8330 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -1.0443 | |
| 96 | S | H | -1.1004 | |
| 97 | E | H | -1.1533 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.2390 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.2872 | |
| 102 | Y | H | 0.0000 | |
| 103 | F | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0679 | |
| 107 | Y | H | 0.2081 | |
| 108 | D | H | 0.2326 | |
| 109 | Y | H | 0.7805 | |
| 110 | N | H | -0.3172 | |
| 113 | Y | H | 0.3321 | |
| 114 | A | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | -0.3100 | |
| 117 | Y | H | 0.1609 | |
| 118 | W | H | -0.0833 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.0648 | |
| 121 | G | H | -0.6920 | |
| 122 | T | H | 0.0000 | |
| 123 | S | H | 0.0414 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.0409 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.6502 | |
| 128 | S | H | -0.8202 | |
| 1 | Q | L | -0.8925 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.9458 | |
| 4 | L | L | 0.0000 | |
| 5 | S | L | -0.6688 | |
| 6 | Q | L | -0.5406 | |
| 7 | S | L | -0.4026 | |
| 8 | P | L | 0.2144 | |
| 9 | A | L | 0.5424 | |
| 10 | I | L | 1.3602 | |
| 11 | L | L | 0.3191 | |
| 12 | S | L | -0.7517 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -2.2555 | |
| 15 | P | L | -2.2940 | |
| 16 | G | L | -2.7782 | |
| 17 | E | L | -3.7677 | |
| 18 | K | L | -3.6808 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.4770 | |
| 21 | M | L | 0.0000 | |
| 22 | T | L | -0.7148 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -1.9023 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.3537 | |
| 27 | S | L | -0.2994 | |
| 28 | S | L | -0.4315 | |
| 29 | V | L | 0.0000 | |
| 37 | S | L | 0.2293 | |
| 38 | Y | L | 0.6270 | |
| 39 | M | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.7941 | |
| 45 | K | L | -1.0236 | |
| 46 | P | L | -0.7370 | |
| 47 | G | L | -0.8709 | |
| 48 | S | L | -0.8711 | |
| 49 | S | L | -0.6464 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -0.8212 | |
| 52 | P | L | -0.4062 | |
| 53 | W | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.2048 | |
| 56 | A | L | 0.0000 | |
| 57 | T | L | 0.0000 | |
| 65 | S | L | -0.3120 | |
| 66 | N | L | -0.4545 | |
| 67 | L | L | 0.0476 | |
| 68 | A | L | -0.2641 | |
| 69 | S | L | -0.4613 | |
| 70 | G | L | -0.5100 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -0.2563 | |
| 74 | A | L | -0.1725 | |
| 75 | R | L | -1.3154 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.4013 | |
| 78 | G | L | -0.3738 | |
| 79 | S | L | -0.5075 | |
| 80 | G | L | -0.7752 | |
| 83 | S | L | -0.6555 | |
| 84 | G | L | -0.6459 | |
| 85 | T | L | -0.9388 | |
| 86 | S | L | -1.1320 | |
| 87 | Y | L | 0.0000 | |
| 88 | S | L | -0.6234 | |
| 89 | F | L | 0.0000 | |
| 90 | T | L | -0.7951 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -2.4678 | |
| 93 | R | L | -3.8655 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -2.8242 | |
| 96 | A | L | -1.3997 | |
| 97 | E | L | -1.1962 | |
| 98 | D | L | 0.0000 | |
| 99 | A | L | -1.0522 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.5599 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | W | L | 0.4650 | |
| 108 | T | L | 0.5678 | |
| 109 | F | L | 0.4763 | |
| 114 | N | L | -0.8484 | |
| 115 | P | L | -0.8923 | |
| 116 | P | L | 0.0000 | |
| 117 | T | L | 0.0516 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.8000 | |
| 121 | G | L | -0.3524 | |
| 122 | T | L | 0.0000 | |
| 123 | R | L | -0.6458 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.2472 | |
| 126 | I | L | -1.2710 | |
| 127 | K | L | -1.8146 |