| Chain sequence(s) |
A: FHLLREVLEAARAEQLAQQAHKNRKLAEII
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:27)
[INFO] Main: Simulation completed successfully. (00:01:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 1.7621 | |
| 2 | H | A | 0.4743 | |
| 3 | L | A | 1.5443 | |
| 4 | L | A | 1.7508 | |
| 5 | R | A | -0.7194 | |
| 6 | E | A | -1.2218 | |
| 7 | V | A | 0.5896 | |
| 8 | L | A | 0.0059 | |
| 9 | E | A | -2.1179 | |
| 10 | A | A | -1.4548 | |
| 11 | A | A | -1.6692 | |
| 12 | R | A | -2.7515 | |
| 13 | A | A | -1.9868 | |
| 14 | E | A | -3.0435 | |
| 15 | Q | A | -2.9744 | |
| 16 | L | A | -1.3621 | |
| 17 | A | A | -2.0724 | |
| 18 | Q | A | -3.3488 | |
| 19 | Q | A | -3.0266 | |
| 20 | A | A | -2.7673 | |
| 21 | H | A | -3.6434 | |
| 22 | K | A | -4.1217 | |
| 23 | N | A | -3.7257 | |
| 24 | R | A | -3.9987 | |
| 25 | K | A | -3.2657 | |
| 26 | L | A | -0.9841 | |
| 27 | A | A | -1.0269 | |
| 28 | E | A | -1.3282 | |
| 29 | I | A | 1.5517 | |
| 30 | I | A | 2.2137 |