| Chain sequence(s) |
L: PTVAPPAPVYR
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 526 | P | L | -0.2677 | |
| 527 | T | L | 0.2069 | |
| 528 | V | L | 1.7707 | |
| 529 | A | L | 0.3402 | |
| 530 | P | L | -0.2910 | |
| 531 | P | L | -0.2910 | |
| 532 | A | L | -0.0351 | |
| 533 | P | L | 0.0784 | |
| 534 | V | L | 1.9662 | |
| 535 | Y | L | 1.3073 | |
| 536 | R | L | -1.6078 |