| Chain sequence(s) |
A: MLPAPKNLVVSRITEDSARLSWTAPDAAFDSFWIRYVERLVWGEAIHLHVPGSERSYDLTGLKPGTEYVVVISGVKGGWESTPLVAPFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:52)
[INFO] Main: Simulation completed successfully. (00:00:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.9865 | |
| 2 | L | A | 0.3258 | |
| 3 | P | A | -0.4145 | |
| 4 | A | A | -0.7409 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -2.1133 | |
| 7 | N | A | -1.4927 | |
| 8 | L | A | 0.1896 | |
| 9 | V | A | 1.1093 | |
| 10 | V | A | 0.2472 | |
| 11 | S | A | -0.6649 | |
| 12 | R | A | -2.0489 | |
| 13 | I | A | -1.0433 | |
| 14 | T | A | -1.7606 | |
| 15 | E | A | -3.0353 | |
| 16 | D | A | -2.7458 | |
| 17 | S | A | -2.1331 | |
| 18 | A | A | 0.0000 | |
| 19 | R | A | -1.3485 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4370 | |
| 22 | W | A | 0.0000 | |
| 23 | T | A | -1.3605 | |
| 24 | A | A | 0.0000 | |
| 25 | P | A | -1.4156 | |
| 26 | D | A | -2.2160 | |
| 27 | A | A | -1.4087 | |
| 28 | A | A | -1.1568 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.2738 | |
| 31 | S | A | -1.6398 | |
| 32 | F | A | 0.0000 | |
| 33 | W | A | -0.4683 | |
| 34 | I | A | 0.0000 | |
| 35 | R | A | -0.8156 | |
| 36 | Y | A | -0.3757 | |
| 37 | V | A | -0.3935 | |
| 38 | E | A | -0.8122 | |
| 39 | R | A | -1.0239 | |
| 40 | L | A | 1.1112 | |
| 41 | V | A | 1.2439 | |
| 42 | W | A | 1.1965 | |
| 43 | G | A | -0.0450 | |
| 44 | E | A | -1.4744 | |
| 45 | A | A | -0.5509 | |
| 46 | I | A | -0.2045 | |
| 47 | H | A | -1.0505 | |
| 48 | L | A | -0.5791 | |
| 49 | H | A | -1.0929 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.2251 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -1.5633 | |
| 54 | E | A | -1.4575 | |
| 55 | R | A | -0.9556 | |
| 56 | S | A | -0.7045 | |
| 57 | Y | A | -0.8620 | |
| 58 | D | A | -1.9793 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.4204 | |
| 61 | G | A | -1.4996 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -3.0283 | |
| 64 | P | A | -2.5025 | |
| 65 | G | A | -1.8195 | |
| 66 | T | A | 0.0000 | |
| 67 | E | A | -1.6931 | |
| 68 | Y | A | 0.0000 | |
| 69 | V | A | -0.2264 | |
| 70 | V | A | 0.0000 | |
| 71 | V | A | 0.6576 | |
| 72 | I | A | 0.0000 | |
| 73 | S | A | 0.0000 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | -1.2190 | |
| 76 | K | A | -1.5526 | |
| 77 | G | A | -1.2293 | |
| 78 | G | A | -0.9256 | |
| 79 | W | A | -0.2190 | |
| 80 | E | A | -1.2793 | |
| 81 | S | A | 0.0000 | |
| 82 | T | A | 0.0331 | |
| 83 | P | A | -0.1285 | |
| 84 | L | A | 0.5693 | |
| 85 | V | A | 2.0105 | |
| 86 | A | A | 1.1763 | |
| 87 | P | A | -0.0222 | |
| 88 | F | A | 0.0000 | |
| 89 | T | A | -1.3364 | |
| 90 | T | A | -1.8116 |