Project name: query_structure

Status: done

Started: 2026-03-16 21:41:07
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Chain sequence(s) A: MLPAPKNLVVSRITEDSARLSWTAPDAAFDSFWIRYVERLVWGEAIHLHVPGSERSYDLTGLKPGTEYVVVISGVKGGWESTPLVAPFTT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:52)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:53)
Show buried residues

Minimal score value
-3.0353
Maximal score value
2.0105
Average score
-0.6682
Total score value
-60.1403

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.9865
2 L A 0.3258
3 P A -0.4145
4 A A -0.7409
5 P A 0.0000
6 K A -2.1133
7 N A -1.4927
8 L A 0.1896
9 V A 1.1093
10 V A 0.2472
11 S A -0.6649
12 R A -2.0489
13 I A -1.0433
14 T A -1.7606
15 E A -3.0353
16 D A -2.7458
17 S A -2.1331
18 A A 0.0000
19 R A -1.3485
20 L A 0.0000
21 S A -0.4370
22 W A 0.0000
23 T A -1.3605
24 A A 0.0000
25 P A -1.4156
26 D A -2.2160
27 A A -1.4087
28 A A -1.1568
29 F A 0.0000
30 D A -2.2738
31 S A -1.6398
32 F A 0.0000
33 W A -0.4683
34 I A 0.0000
35 R A -0.8156
36 Y A -0.3757
37 V A -0.3935
38 E A -0.8122
39 R A -1.0239
40 L A 1.1112
41 V A 1.2439
42 W A 1.1965
43 G A -0.0450
44 E A -1.4744
45 A A -0.5509
46 I A -0.2045
47 H A -1.0505
48 L A -0.5791
49 H A -1.0929
50 V A 0.0000
51 P A -1.2251
52 G A 0.0000
53 S A -1.5633
54 E A -1.4575
55 R A -0.9556
56 S A -0.7045
57 Y A -0.8620
58 D A -1.9793
59 L A 0.0000
60 T A -1.4204
61 G A -1.4996
62 L A 0.0000
63 K A -3.0283
64 P A -2.5025
65 G A -1.8195
66 T A 0.0000
67 E A -1.6931
68 Y A 0.0000
69 V A -0.2264
70 V A 0.0000
71 V A 0.6576
72 I A 0.0000
73 S A 0.0000
74 G A 0.0000
75 V A -1.2190
76 K A -1.5526
77 G A -1.2293
78 G A -0.9256
79 W A -0.2190
80 E A -1.2793
81 S A 0.0000
82 T A 0.0331
83 P A -0.1285
84 L A 0.5693
85 V A 2.0105
86 A A 1.1763
87 P A -0.0222
88 F A 0.0000
89 T A -1.3364
90 T A -1.8116
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Laboratory of Theory of Biopolymers 2018