| Chain sequence(s) |
A: ANSSKAVCNLPKLAGDETCSNKTEIRWYYNGTACEAFIFKGCGGNDNNFDRRVDDCQRLC
B: ANSKAVCNLPKLAGDEETCSSNKTEIRWYYNGTACEEAFIFKGCGGNDNNFDRRVDDCQRLC input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:07)
[INFO] Main: Simulation completed successfully. (00:01:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.8058 | |
| 2 | N | A | -1.8085 | |
| 3 | S | A | -1.6915 | |
| 4 | K | A | -2.1332 | |
| 5 | A | A | -1.4864 | |
| 6 | V | A | -1.3075 | |
| 7 | C | A | 0.0000 | |
| 8 | N | A | -1.7510 | |
| 9 | L | A | -0.7369 | |
| 10 | P | A | -1.0003 | |
| 11 | K | A | -1.4168 | |
| 12 | L | A | -0.2245 | |
| 13 | A | A | -0.5263 | |
| 14 | G | A | -1.4537 | |
| 15 | D | A | -2.7681 | |
| 16 | E | A | -2.9252 | |
| 17 | T | A | -1.6005 | |
| 18 | C | A | -1.6347 | |
| 19 | S | A | -1.6129 | |
| 20 | N | A | -2.7861 | |
| 21 | K | A | -2.7600 | |
| 22 | T | A | -1.5965 | |
| 23 | E | A | -1.0898 | |
| 24 | I | A | 0.7577 | |
| 25 | R | A | -0.5316 | |
| 26 | W | A | -1.0305 | |
| 27 | Y | A | -1.3799 | |
| 28 | Y | A | -0.8352 | |
| 29 | N | A | -1.4849 | |
| 30 | G | A | -1.0175 | |
| 31 | T | A | -0.5160 | |
| 32 | A | A | -0.5458 | |
| 33 | C | A | -1.1322 | |
| 34 | E | A | -1.0074 | |
| 35 | A | A | 0.0343 | |
| 36 | F | A | 0.0000 | |
| 37 | I | A | 1.6555 | |
| 38 | F | A | 0.0000 | |
| 39 | K | A | -1.7333 | |
| 40 | G | A | -1.7609 | |
| 41 | C | A | -1.5764 | |
| 42 | G | A | -1.2760 | |
| 43 | G | A | -1.2121 | |
| 44 | N | A | -1.2593 | |
| 45 | D | A | -2.0961 | |
| 46 | N | A | 0.0000 | |
| 47 | N | A | -1.4483 | |
| 48 | F | A | 0.0000 | |
| 49 | D | A | -2.9680 | |
| 50 | R | A | -3.3889 | |
| 51 | V | A | -2.6463 | |
| 52 | D | A | -3.8084 | |
| 53 | D | A | -3.6926 | |
| 54 | C | A | 0.0000 | |
| 55 | Q | A | -2.9169 | |
| 56 | R | A | -3.0285 | |
| 57 | L | A | -1.8027 | |
| 58 | C | A | -1.4667 | |
| 1 | A | B | -0.8028 | |
| 2 | N | B | -1.7964 | |
| 3 | S | B | -1.7071 | |
| 4 | K | B | -2.1111 | |
| 5 | A | B | -1.5133 | |
| 6 | V | B | -1.3189 | |
| 7 | C | B | -1.2980 | |
| 8 | N | B | -1.7655 | |
| 9 | L | B | -0.7239 | |
| 10 | P | B | -0.9782 | |
| 11 | K | B | -1.4010 | |
| 12 | L | B | -0.1836 | |
| 13 | A | B | -0.5308 | |
| 14 | G | B | -1.4827 | |
| 15 | D | B | -2.8424 | |
| 16 | E | B | -2.9664 | |
| 17 | T | B | -1.7716 | |
| 18 | C | B | -2.0277 | |
| 19 | S | B | -2.0460 | |
| 20 | N | B | -2.8049 | |
| 21 | K | B | -2.7534 | |
| 22 | T | B | -1.6950 | |
| 23 | E | B | -1.2820 | |
| 24 | I | B | 0.2881 | |
| 25 | R | B | -0.8232 | |
| 26 | W | B | -1.3044 | |
| 27 | Y | B | -1.4908 | |
| 28 | Y | B | -0.8917 | |
| 29 | N | B | -1.6291 | |
| 30 | G | B | -1.1688 | |
| 31 | T | B | -0.5979 | |
| 32 | A | B | -0.6155 | |
| 33 | C | B | -1.2438 | |
| 34 | E | B | -1.1678 | |
| 35 | A | B | -0.1706 | |
| 36 | F | B | 0.0000 | |
| 37 | I | B | 1.4072 | |
| 38 | F | B | 0.0000 | |
| 39 | K | B | -1.8096 | |
| 40 | G | B | -1.8435 | |
| 41 | C | B | -1.6144 | |
| 42 | G | B | -1.2773 | |
| 43 | G | B | -1.2019 | |
| 44 | N | B | -1.2495 | |
| 45 | D | B | -2.0828 | |
| 46 | N | B | 0.0000 | |
| 47 | N | B | -1.5776 | |
| 48 | F | B | 0.0000 | |
| 49 | D | B | -3.1400 | |
| 50 | R | B | -3.5764 | |
| 51 | V | B | -2.8038 | |
| 52 | D | B | -3.8724 | |
| 53 | D | B | -4.0869 | |
| 54 | C | B | 0.0000 | |
| 55 | Q | B | -3.0213 | |
| 56 | R | B | -3.1280 | |
| 57 | L | B | -1.8653 | |
| 58 | C | B | -1.5117 |