| Chain sequence(s) |
A: MAQVQLVESGGGLVQAGDSLQLSCAFSGGTFSTYAMGWFRQAPGKEREFVGGISRSGATTNYEDSVKGRFTISKDNTKNTVYLQLNSLKPEDTAVYYCAARNNILPVTTIDKYEYWGQGTQVTV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:23)
[INFO] Main: Simulation completed successfully. (00:01:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7471 | |
| 2 | A | A | -0.2607 | |
| 3 | Q | A | -1.1796 | |
| 4 | V | A | -1.0111 | |
| 5 | Q | A | -1.2361 | |
| 6 | L | A | 0.0000 | |
| 7 | V | A | 0.4552 | |
| 8 | E | A | 0.0000 | |
| 9 | S | A | -0.5909 | |
| 10 | G | A | -0.7660 | |
| 11 | G | A | -0.6764 | |
| 12 | G | A | 0.0549 | |
| 13 | L | A | 1.1713 | |
| 14 | V | A | -0.0071 | |
| 15 | Q | A | -1.2875 | |
| 16 | A | A | -1.5039 | |
| 17 | G | A | -1.6209 | |
| 18 | D | A | -1.7093 | |
| 19 | S | A | -1.4083 | |
| 20 | L | A | -0.8038 | |
| 21 | Q | A | -1.4191 | |
| 22 | L | A | 0.0000 | |
| 23 | S | A | -0.3384 | |
| 24 | C | A | 0.0000 | |
| 25 | A | A | -0.3748 | |
| 26 | F | A | 0.0000 | |
| 27 | S | A | -0.7888 | |
| 28 | G | A | -0.7059 | |
| 29 | G | A | -0.7369 | |
| 30 | T | A | -0.6336 | |
| 31 | F | A | 0.0000 | |
| 32 | S | A | -1.2463 | |
| 33 | T | A | -0.6433 | |
| 34 | Y | A | 0.0000 | |
| 35 | A | A | 0.0000 | |
| 36 | M | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | W | A | 0.0000 | |
| 39 | F | A | 0.0000 | |
| 40 | R | A | -1.4838 | |
| 41 | Q | A | -2.3653 | |
| 42 | A | A | -2.1649 | |
| 43 | P | A | -1.4872 | |
| 44 | G | A | -2.0001 | |
| 45 | K | A | -3.4498 | |
| 46 | E | A | -3.7167 | |
| 47 | R | A | -3.0589 | |
| 48 | E | A | -2.1954 | |
| 49 | F | A | -0.6980 | |
| 50 | V | A | 0.0000 | |
| 51 | G | A | 0.0000 | |
| 52 | G | A | -0.5196 | |
| 53 | I | A | 0.0000 | |
| 54 | S | A | -0.9896 | |
| 55 | R | A | -1.5901 | |
| 56 | S | A | -1.0216 | |
| 57 | G | A | -1.0053 | |
| 58 | A | A | -0.3865 | |
| 59 | T | A | -0.6251 | |
| 60 | T | A | -0.7217 | |
| 61 | N | A | -1.8728 | |
| 62 | Y | A | -1.9762 | |
| 63 | E | A | -2.7122 | |
| 64 | D | A | -3.1392 | |
| 65 | S | A | -1.9833 | |
| 66 | V | A | 0.0000 | |
| 67 | K | A | -3.0971 | |
| 68 | G | A | -1.8738 | |
| 69 | R | A | -1.3964 | |
| 70 | F | A | 0.0000 | |
| 71 | T | A | -1.0243 | |
| 72 | I | A | 0.0000 | |
| 73 | S | A | -0.5982 | |
| 74 | K | A | -1.3926 | |
| 75 | D | A | -1.9960 | |
| 76 | N | A | -2.6294 | |
| 77 | T | A | -1.9400 | |
| 78 | K | A | -2.6716 | |
| 79 | N | A | -2.3322 | |
| 80 | T | A | 0.0000 | |
| 81 | V | A | 0.0000 | |
| 82 | Y | A | -0.4831 | |
| 83 | L | A | 0.0000 | |
| 84 | Q | A | -1.2489 | |
| 85 | L | A | 0.0000 | |
| 86 | N | A | -1.4118 | |
| 87 | S | A | -1.3931 | |
| 88 | L | A | 0.0000 | |
| 89 | K | A | -2.3951 | |
| 90 | P | A | -1.8297 | |
| 91 | E | A | -2.3129 | |
| 92 | D | A | 0.0000 | |
| 93 | T | A | -0.8952 | |
| 94 | A | A | 0.0000 | |
| 95 | V | A | -0.7117 | |
| 96 | Y | A | 0.0000 | |
| 97 | Y | A | -0.3904 | |
| 98 | C | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | A | A | 0.0000 | |
| 101 | R | A | -1.3936 | |
| 102 | N | A | -0.8595 | |
| 103 | N | A | 0.5576 | |
| 104 | I | A | 2.3866 | |
| 105 | L | A | 2.2409 | |
| 106 | P | A | 0.9272 | |
| 107 | V | A | 0.3731 | |
| 108 | T | A | -0.0687 | |
| 109 | T | A | -0.4109 | |
| 110 | I | A | -0.1274 | |
| 111 | D | A | -2.2269 | |
| 112 | K | A | -2.6621 | |
| 113 | Y | A | -1.7701 | |
| 114 | E | A | -2.3438 | |
| 115 | Y | A | -1.0214 | |
| 116 | W | A | -0.1597 | |
| 117 | G | A | -0.2533 | |
| 118 | Q | A | -0.9998 | |
| 119 | G | A | -0.6712 | |
| 120 | T | A | 0.0000 | |
| 121 | Q | A | -1.0551 | |
| 122 | V | A | 0.0000 | |
| 123 | T | A | -0.1187 | |
| 124 | V | A | -0.5675 |