Project name: query_structure

Status: done

Started: 2026-03-16 23:58:59
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Chain sequence(s) A: MAQVQLVESGGGLVQAGDSLQLSCAFSGGTFSTYAMGWFRQAPGKEREFVGGISRSGATTNYEDSVKGRFTISKDNTKNTVYLQLNSLKPEDTAVYYCAARNNILPVTTIDKYEYWGQGTQVTV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:23)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:23)
Show buried residues

Minimal score value
-3.7167
Maximal score value
2.3866
Average score
-0.8382
Total score value
-103.9313

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.7471
2 A A -0.2607
3 Q A -1.1796
4 V A -1.0111
5 Q A -1.2361
6 L A 0.0000
7 V A 0.4552
8 E A 0.0000
9 S A -0.5909
10 G A -0.7660
11 G A -0.6764
12 G A 0.0549
13 L A 1.1713
14 V A -0.0071
15 Q A -1.2875
16 A A -1.5039
17 G A -1.6209
18 D A -1.7093
19 S A -1.4083
20 L A -0.8038
21 Q A -1.4191
22 L A 0.0000
23 S A -0.3384
24 C A 0.0000
25 A A -0.3748
26 F A 0.0000
27 S A -0.7888
28 G A -0.7059
29 G A -0.7369
30 T A -0.6336
31 F A 0.0000
32 S A -1.2463
33 T A -0.6433
34 Y A 0.0000
35 A A 0.0000
36 M A 0.0000
37 G A 0.0000
38 W A 0.0000
39 F A 0.0000
40 R A -1.4838
41 Q A -2.3653
42 A A -2.1649
43 P A -1.4872
44 G A -2.0001
45 K A -3.4498
46 E A -3.7167
47 R A -3.0589
48 E A -2.1954
49 F A -0.6980
50 V A 0.0000
51 G A 0.0000
52 G A -0.5196
53 I A 0.0000
54 S A -0.9896
55 R A -1.5901
56 S A -1.0216
57 G A -1.0053
58 A A -0.3865
59 T A -0.6251
60 T A -0.7217
61 N A -1.8728
62 Y A -1.9762
63 E A -2.7122
64 D A -3.1392
65 S A -1.9833
66 V A 0.0000
67 K A -3.0971
68 G A -1.8738
69 R A -1.3964
70 F A 0.0000
71 T A -1.0243
72 I A 0.0000
73 S A -0.5982
74 K A -1.3926
75 D A -1.9960
76 N A -2.6294
77 T A -1.9400
78 K A -2.6716
79 N A -2.3322
80 T A 0.0000
81 V A 0.0000
82 Y A -0.4831
83 L A 0.0000
84 Q A -1.2489
85 L A 0.0000
86 N A -1.4118
87 S A -1.3931
88 L A 0.0000
89 K A -2.3951
90 P A -1.8297
91 E A -2.3129
92 D A 0.0000
93 T A -0.8952
94 A A 0.0000
95 V A -0.7117
96 Y A 0.0000
97 Y A -0.3904
98 C A 0.0000
99 A A 0.0000
100 A A 0.0000
101 R A -1.3936
102 N A -0.8595
103 N A 0.5576
104 I A 2.3866
105 L A 2.2409
106 P A 0.9272
107 V A 0.3731
108 T A -0.0687
109 T A -0.4109
110 I A -0.1274
111 D A -2.2269
112 K A -2.6621
113 Y A -1.7701
114 E A -2.3438
115 Y A -1.0214
116 W A -0.1597
117 G A -0.2533
118 Q A -0.9998
119 G A -0.6712
120 T A 0.0000
121 Q A -1.0551
122 V A 0.0000
123 T A -0.1187
124 V A -0.5675
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Laboratory of Theory of Biopolymers 2018