| Chain sequence(s) |
L: KRKRKRKRKR
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:30)
[INFO] Main: Simulation completed successfully. (00:00:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 666 | K | L | -2.0366 | |
| 667 | R | L | -2.4668 | |
| 668 | K | L | -2.3773 | |
| 669 | R | L | -2.4692 | |
| 670 | K | L | -2.3795 | |
| 671 | R | L | -2.4704 | |
| 672 | K | L | -2.3803 | |
| 673 | R | L | -2.4736 | |
| 674 | K | L | -2.3851 | |
| 675 | R | L | -2.1602 |