Project name: query_structure

Status: done

Started: 2026-03-16 22:59:15
Settings
Chain sequence(s) A: CGETCTLGTCYTQGCTCSWPICKRNGLPV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:10)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:10)
Show buried residues

Minimal score value
-1.9398
Maximal score value
1.5339
Average score
0.1235
Total score value
3.5814

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A 0.4289
2 G A 0.1116
3 E A 0.1327
4 T A 0.6015
5 C A 0.0000
6 T A 0.9932
7 L A 1.5339
8 G A 0.7728
9 T A 0.8428
10 C A 0.7707
11 Y A 0.9957
12 T A -0.3271
13 Q A -1.2124
14 G A -1.4677
15 C A -1.0240
16 T A -0.6695
17 C A 0.4501
18 S A 0.4599
19 W A 1.4873
20 P A 1.0525
21 I A 0.9208
22 C A 0.0000
23 K A -0.7148
24 R A -1.9398
25 N A -1.8882
26 G A -0.9400
27 L A 0.4650
28 P A 0.4040
29 V A 1.3415
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Laboratory of Theory of Biopolymers 2018