| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGRGTIGHPLFNKLGDTENPTAVVHETADVRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPEGHPLPDAPPPSPLYTPPPPTSPTAVRPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPKENVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9481 | |
| 2 | L | A | 1.9710 | |
| 3 | P | A | 0.6581 | |
| 4 | P | A | 0.3687 | |
| 5 | T | A | 0.1212 | |
| 6 | T | A | 0.1297 | |
| 7 | P | A | 0.1906 | |
| 8 | V | A | 1.2277 | |
| 9 | A | A | 0.0428 | |
| 10 | K | A | -1.1462 | |
| 11 | V | A | -0.3792 | |
| 12 | Q | A | -1.5036 | |
| 13 | S | A | -1.5707 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3532 | |
| 16 | E | A | -2.4081 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4752 | |
| 20 | P | A | 0.1191 | |
| 21 | T | A | 0.1179 | |
| 22 | S | A | -0.1681 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0936 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2534 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8648 | |
| 31 | R | A | -2.6451 | |
| 32 | L | A | -0.7739 | |
| 33 | L | A | 1.1728 | |
| 34 | T | A | 1.3746 | |
| 35 | V | A | 1.8405 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2365 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6361 | |
| 40 | K | A | -1.6450 | |
| 41 | D | A | -0.9355 | |
| 42 | I | A | 0.8146 | |
| 43 | V | A | 1.0166 | |
| 44 | K | A | -1.1837 | |
| 45 | N | A | -1.9255 | |
| 46 | G | A | -1.2340 | |
| 47 | K | A | -0.9434 | |
| 48 | V | A | 1.4972 | |
| 49 | V | A | 2.0566 | |
| 50 | V | A | 1.2744 | |
| 51 | P | A | 0.4597 | |
| 52 | K | A | -0.6422 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1221 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3753 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2759 | |
| 70 | K | A | -1.8172 | |
| 71 | F | A | -0.6700 | |
| 72 | A | A | -0.5851 | |
| 73 | L | A | -0.8718 | |
| 74 | P | A | -1.2641 | |
| 75 | Q | A | -2.4790 | |
| 76 | K | A | -3.0946 | |
| 77 | D | A | -2.9833 | |
| 78 | F | A | -1.6329 | |
| 79 | Y | A | -1.9083 | |
| 80 | D | A | -2.7452 | |
| 81 | P | A | -2.4066 | |
| 82 | E | A | -3.0684 | |
| 83 | K | A | -3.4364 | |
| 84 | E | A | -2.4996 | |
| 85 | R | A | -1.3162 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6641 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9506 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3119 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6767 | |
| 99 | G | A | -0.5391 | |
| 100 | P | A | -0.4895 | |
| 101 | L | A | -0.1307 | |
| 102 | G | A | -0.6284 | |
| 103 | R | A | -1.4157 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.5401 | |
| 106 | I | A | 0.0000 | |
| 107 | G | A | 0.1812 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4268 | |
| 110 | L | A | 0.4028 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0025 | |
| 113 | K | A | -0.5182 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.1926 | |
| 117 | T | A | -1.0755 | |
| 118 | E | A | -2.6290 | |
| 119 | N | A | -2.3899 | |
| 120 | P | A | -1.1002 | |
| 121 | T | A | -0.3963 | |
| 122 | A | A | 0.6918 | |
| 123 | V | A | 1.9747 | |
| 124 | V | A | 0.8661 | |
| 125 | H | A | -0.2999 | |
| 126 | E | A | -1.6985 | |
| 127 | T | A | -1.0947 | |
| 128 | A | A | -1.3688 | |
| 129 | D | A | -1.9949 | |
| 130 | V | A | -1.1226 | |
| 131 | R | A | -0.7687 | |
| 132 | V | A | 0.3613 | |
| 133 | A | A | 0.4328 | |
| 134 | F | A | 0.2753 | |
| 135 | S | A | -0.0295 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | 0.0000 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5563 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2462 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0898 | |
| 157 | D | A | 0.3227 | |
| 158 | I | A | 0.8285 | |
| 159 | A | A | 0.1093 | |
| 160 | E | A | -1.4856 | |
| 161 | P | A | -0.2533 | |
| 162 | C | A | 0.1754 | |
| 163 | P | A | -0.1710 | |
| 164 | G | A | -0.0720 | |
| 165 | L | A | 0.6032 | |
| 166 | P | A | -0.1060 | |
| 167 | P | A | -0.3364 | |
| 168 | G | A | -0.4136 | |
| 169 | A | A | -0.0095 | |
| 170 | C | A | 0.7569 | |
| 171 | P | A | 0.5445 | |
| 172 | P | A | 0.6812 | |
| 173 | I | A | 2.0333 | |
| 174 | Q | A | 0.8447 | |
| 175 | L | A | 1.4419 | |
| 176 | V | A | 0.8183 | |
| 177 | N | A | -0.2900 | |
| 178 | S | A | 0.0326 | |
| 179 | V | A | 0.4453 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3846 | |
| 182 | D | A | 0.0816 | |
| 183 | G | A | -0.1603 | |
| 184 | D | A | -0.6025 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4865 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1280 | |
| 190 | F | A | 0.0227 | |
| 191 | G | A | -0.1492 | |
| 192 | N | A | -0.3564 | |
| 193 | M | A | -0.2065 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4307 | |
| 197 | E | A | -2.6302 | |
| 198 | L | A | -1.2287 | |
| 199 | Q | A | -2.5350 | |
| 200 | Q | A | -3.3479 | |
| 201 | D | A | -3.6039 | |
| 202 | R | A | -3.3439 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1927 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3936 | |
| 211 | S | A | -1.9225 | |
| 212 | T | A | -1.5210 | |
| 213 | R | A | -2.2934 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.2304 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3387 | |
| 220 | L | A | 0.5316 | |
| 221 | K | A | -1.2484 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8720 | |
| 224 | N | A | -1.5578 | |
| 225 | E | A | -1.3094 | |
| 226 | A | A | -0.6669 | |
| 227 | Y | A | -0.4090 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6968 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0962 | |
| 234 | F | A | 0.2872 | |
| 235 | G | A | -0.8434 | |
| 236 | R | A | -2.6850 | |
| 237 | R | A | -3.0481 | |
| 238 | E | A | -2.1908 | |
| 239 | Q | A | -0.1742 | |
| 240 | V | A | 1.5222 | |
| 241 | Y | A | 1.2475 | |
| 242 | A | A | 0.1960 | |
| 243 | R | A | -1.2288 | |
| 244 | H | A | -1.1440 | |
| 245 | F | A | -0.1774 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.5522 | |
| 249 | A | A | -1.1394 | |
| 250 | G | A | -1.0092 | |
| 251 | P | A | -1.0805 | |
| 252 | E | A | -1.3424 | |
| 253 | G | A | -1.2587 | |
| 254 | H | A | -1.4543 | |
| 255 | P | A | -1.3572 | |
| 256 | L | A | -0.4330 | |
| 257 | P | A | -0.8861 | |
| 258 | D | A | -1.9101 | |
| 259 | A | A | -0.9022 | |
| 260 | P | A | -0.9214 | |
| 261 | P | A | -0.6192 | |
| 262 | P | A | -0.3167 | |
| 263 | S | A | -0.1813 | |
| 264 | P | A | 0.4232 | |
| 265 | L | A | 1.4930 | |
| 266 | Y | A | 0.6061 | |
| 267 | T | A | -0.1198 | |
| 268 | P | A | -0.5342 | |
| 269 | P | A | -0.2452 | |
| 270 | P | A | -0.5179 | |
| 271 | P | A | -0.2708 | |
| 272 | T | A | -0.1891 | |
| 273 | S | A | -0.1111 | |
| 274 | P | A | 0.1512 | |
| 275 | T | A | 0.2985 | |
| 276 | A | A | 0.3250 | |
| 277 | V | A | 1.1478 | |
| 278 | R | A | -0.1246 | |
| 279 | P | A | -0.2319 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.4600 | |
| 282 | D | A | -0.7586 | |
| 283 | Y | A | 0.9655 | |
| 284 | F | A | 0.7484 | |
| 285 | G | A | 0.1546 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.7905 | |
| 291 | L | A | 1.5258 | |
| 292 | V | A | 0.4973 | |
| 293 | S | A | -0.1634 | |
| 294 | S | A | -0.9686 | |
| 295 | D | A | -1.8438 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1406 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6126 | |
| 301 | R | A | -1.8255 | |
| 302 | P | A | -0.9354 | |
| 303 | F | A | -0.1518 | |
| 304 | W | A | -0.5192 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0871 | |
| 307 | R | A | -2.8285 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2640 | |
| 310 | G | A | -1.2246 | |
| 311 | N | A | -1.2907 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9386 | |
| 319 | N | A | -0.8983 | |
| 320 | E | A | -1.0528 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.5423 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.3746 | |
| 333 | N | A | 0.4121 | |
| 334 | F | A | 1.7052 | |
| 335 | T | A | 0.8641 | |
| 336 | I | A | 0.4818 | |
| 337 | S | A | -0.7970 | |
| 338 | Q | A | -1.4922 | |
| 339 | Q | A | -0.8896 | |
| 340 | L | A | 0.8383 | |
| 341 | C | A | 0.2365 | |
| 342 | T | A | -0.4883 | |
| 343 | P | A | -1.1546 | |
| 344 | K | A | -2.3399 | |
| 345 | E | A | -2.6123 | |
| 346 | N | A | -1.5451 | |
| 347 | V | A | 0.4366 | |
| 348 | Y | A | 0.8596 | |
| 349 | D | A | -0.1733 | |
| 350 | P | A | -0.2848 | |
| 351 | S | A | -0.2039 | |
| 352 | C | A | -0.1261 | |
| 353 | F | A | -0.4799 | |
| 354 | K | A | -1.5881 | |
| 355 | N | A | -1.6665 | |
| 356 | Y | A | -0.0539 | |
| 357 | L | A | 0.6443 | |
| 358 | R | A | 0.9515 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3574 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0250 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9316 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6660 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2768 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3191 | |
| 376 | L | A | -1.7481 | |
| 377 | D | A | -2.0274 | |
| 378 | P | A | -1.0602 | |
| 379 | G | A | -1.0204 | |
| 380 | V | A | -0.9317 | |
| 381 | L | A | -0.5409 | |
| 382 | A | A | -0.6596 | |
| 383 | H | A | -0.8436 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4078 | |
| 386 | T | A | -0.5789 | |
| 387 | M | A | -0.3345 | |
| 388 | N | A | -0.8718 | |
| 389 | P | A | -1.2770 | |
| 390 | T | A | -1.5550 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5290 | |
| 393 | E | A | -2.9240 | |
| 394 | N | A | -2.6242 | |
| 395 | W | A | -1.5112 | |
| 396 | N | A | -1.3240 | |
| 397 | L | A | -0.1611 | |
| 398 | G | A | 0.5455 | |
| 399 | F | A | 2.4315 | |
| 400 | V | A | 1.8584 | |
| 401 | P | A | 0.0627 | |
| 402 | P | A | -1.9136 | |
| 403 | K | A | -3.5509 | |
| 404 | E | A | -3.9433 | |
| 405 | R | A | -4.3149 | |
| 406 | E | A | -3.9389 | |
| 407 | D | A | -2.9306 | |
| 408 | P | A | -1.7917 | |
| 409 | Y | A | -0.9796 | |
| 410 | K | A | -2.0930 | |
| 411 | G | A | -0.6335 | |
| 412 | L | A | 0.6714 | |
| 413 | I | A | 1.5812 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4066 | |
| 416 | E | A | -1.6815 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9183 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0395 | |
| 421 | E | A | -2.7424 | |
| 422 | R | A | -2.5582 | |
| 423 | F | A | -1.2574 | |
| 424 | S | A | -1.4389 | |
| 425 | Q | A | -1.8920 | |
| 426 | D | A | -2.8878 | |
| 427 | L | A | -1.9839 | |
| 428 | D | A | -2.7771 | |
| 429 | Q | A | -2.6099 | |
| 430 | F | A | -1.4254 | |
| 431 | A | A | -0.8627 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5482 | |
| 435 | K | A | -0.7113 | |
| 436 | F | A | 0.1631 | |
| 437 | L | A | 1.0423 | |
| 438 | Y | A | 0.8354 | |
| 439 | Q | A | -0.2595 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine