| Chain sequence(s) |
A: SIVHQKAHTSVTCPEGWSECGVAIYGYAFCGRWGCGHFLNSGPNISPYVTTDAYEWYVDAW
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:32)
[INFO] Main: Simulation completed successfully. (00:00:33)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | 1.3698 | |
| 2 | I | A | 2.4700 | |
| 3 | V | A | 2.2585 | |
| 4 | H | A | 0.0183 | |
| 5 | Q | A | -0.8803 | |
| 6 | K | A | -1.6835 | |
| 7 | A | A | -1.4074 | |
| 8 | H | A | -1.7359 | |
| 9 | T | A | -0.8999 | |
| 10 | S | A | 0.1217 | |
| 11 | V | A | 1.7404 | |
| 12 | T | A | 0.8638 | |
| 13 | C | A | 0.1064 | |
| 14 | P | A | -0.5735 | |
| 15 | E | A | -1.8704 | |
| 16 | G | A | -1.1457 | |
| 17 | W | A | -0.7125 | |
| 18 | S | A | -0.5005 | |
| 19 | E | A | -0.6811 | |
| 20 | C | A | 0.2846 | |
| 21 | G | A | 0.7583 | |
| 22 | V | A | 1.8382 | |
| 23 | A | A | 1.9702 | |
| 24 | I | A | 2.9874 | |
| 25 | Y | A | 2.5701 | |
| 26 | G | A | 1.5002 | |
| 27 | Y | A | 1.5839 | |
| 28 | A | A | 0.7123 | |
| 29 | F | A | 1.0592 | |
| 30 | C | A | 0.1012 | |
| 31 | G | A | -0.6803 | |
| 32 | R | A | -1.4823 | |
| 33 | W | A | -0.3250 | |
| 34 | G | A | 0.0000 | |
| 35 | C | A | 0.0000 | |
| 36 | G | A | 0.2812 | |
| 37 | H | A | 0.4814 | |
| 38 | F | A | 1.7079 | |
| 39 | L | A | 1.2361 | |
| 40 | N | A | -0.3811 | |
| 41 | S | A | -0.2719 | |
| 42 | G | A | -0.0281 | |
| 43 | P | A | 0.5122 | |
| 44 | N | A | 0.1988 | |
| 45 | I | A | 0.2510 | |
| 46 | S | A | -0.0311 | |
| 47 | P | A | 0.3350 | |
| 48 | Y | A | 1.4185 | |
| 49 | V | A | 1.4743 | |
| 50 | T | A | 0.7883 | |
| 51 | T | A | -0.2599 | |
| 52 | D | A | -1.6529 | |
| 53 | A | A | -1.0453 | |
| 54 | Y | A | -0.3724 | |
| 55 | E | A | -1.4300 | |
| 56 | W | A | 0.4570 | |
| 57 | Y | A | 0.7383 | |
| 58 | V | A | 1.5531 | |
| 59 | D | A | 0.0448 | |
| 60 | A | A | 0.8348 | |
| 61 | W | A | 1.4838 |