Project name: 8f8adae38c8f27e

Status: done

Started: 2024-06-17 02:13:08
Settings
Chain sequence(s) A: AKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGRPKAPQVYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLHNHHTEKSLSHSPGK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:46)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:48)
Show buried residues

Minimal score value
-3.9155
Maximal score value
2.6039
Average score
-0.8189
Total score value
-265.3317

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -1.1428
2 K A -1.8455
3 T A -0.9747
4 T A -0.4576
5 P A -0.7593
6 P A 0.0000
7 S A -0.2855
8 V A 0.0000
9 Y A 0.3988
10 P A 0.3554
11 L A 0.7220
12 A A 0.1087
13 P A -0.4243
14 G A -0.8026
15 S A -0.9029
16 A A -0.5587
17 A A -1.0656
18 Q A -1.7470
19 T A -1.2537
20 N A -1.6325
21 S A -0.8926
22 M A -0.3385
23 V A 0.0000
24 T A -0.0281
25 L A 0.0000
26 G A 0.0000
27 C A 0.0000
28 L A 0.4736
29 V A 0.0000
30 K A -0.7404
31 G A -0.7322
32 Y A 0.0000
33 F A -0.8096
34 P A -1.0957
35 E A -1.5960
36 P A -1.1739
37 V A -0.6212
38 T A -0.3856
39 V A -0.0522
40 T A -0.3047
41 W A 0.0000
42 N A -0.9959
43 S A -0.7320
44 G A -0.5257
45 S A -0.4627
46 L A -0.2153
47 S A -0.4581
48 S A -0.4768
49 G A -0.5608
50 V A -0.1063
51 H A -0.6339
52 T A 0.1306
53 F A 0.9450
54 P A 0.5703
55 A A 0.4704
56 V A 1.1325
57 L A 0.5486
58 Q A -0.8895
59 S A -1.2319
60 D A -1.7804
61 L A -0.7997
62 Y A -0.1634
63 T A 0.0899
64 L A 0.0000
65 S A 0.3979
66 S A 0.0000
67 S A 0.0343
68 V A 0.0000
69 T A -0.1769
70 V A 0.0000
71 P A -0.3236
72 S A -0.9513
73 S A -0.7699
74 T A -0.8701
75 W A 0.0000
76 P A -0.7571
77 S A -1.2654
78 E A -2.0509
79 T A -1.0717
80 V A 0.0000
81 T A -1.3846
82 C A 0.0000
83 N A 0.0000
84 V A 0.0000
85 A A -0.9220
86 H A 0.0000
87 P A -0.8778
88 A A -0.4980
89 S A -0.4739
90 S A -0.7358
91 T A -0.9629
92 K A -2.0566
93 V A -1.5401
94 D A -2.6182
95 K A -1.6764
96 K A -1.5418
97 I A 0.0000
98 V A 0.5319
99 P A -0.7612
100 R A -2.2031
101 D A -2.1583
102 C A -0.8635
103 G A -1.0324
104 C A -0.3112
105 K A -0.9940
106 P A 0.2209
107 C A 1.4692
108 I A 2.6039
109 C A 2.3417
110 T A 1.2721
111 V A 1.2831
112 P A -0.0767
113 E A -1.0344
114 V A 0.4128
115 S A 0.0000
116 S A -0.1808
117 V A 0.0000
118 F A 1.1489
119 I A 0.8127
120 F A 0.9574
121 P A -0.2535
122 P A 0.0000
123 K A -2.0386
124 P A -1.4066
125 K A -0.7542
126 D A -0.5437
127 V A 0.0000
128 L A -0.2278
129 T A 0.7410
130 I A 2.1043
131 T A 1.1770
132 L A 1.0079
133 T A 0.2905
134 P A 0.0000
135 K A -0.9546
136 V A 0.0000
137 T A 0.0630
138 C A 0.0000
139 V A 0.0000
140 V A 0.0000
141 V A -0.7160
142 D A -1.4475
143 I A 0.0000
144 S A -1.8713
145 K A -3.2828
146 D A -2.9995
147 D A -2.0804
148 P A -1.9460
149 E A -2.7354
150 V A -1.5997
151 Q A -1.7362
152 F A -1.2590
153 S A -1.2318
154 W A 0.0000
155 F A -1.3189
156 V A -1.3357
157 D A -2.5090
158 D A -2.2066
159 V A -0.1308
160 E A -1.5394
161 V A -0.6919
162 H A -1.3655
163 T A -0.9743
164 A A -1.1787
165 Q A -1.8316
166 T A -1.6655
167 Q A -2.4014
168 P A -2.5468
169 R A -3.5295
170 E A -3.9155
171 E A -3.4333
172 Q A -1.4324
173 F A 0.9441
174 N A -0.4958
175 S A -1.3112
176 T A -2.1358
177 F A 0.0000
178 R A -2.6532
179 S A 0.0000
180 V A 0.0000
181 S A 0.0000
182 E A -1.0977
183 L A 0.0000
184 P A -0.4783
185 I A 0.0478
186 M A 0.5920
187 H A 0.0125
188 Q A -1.0226
189 D A -1.5287
190 W A 0.0000
191 L A -0.9560
192 N A -2.2176
193 G A -2.1454
194 K A -2.5715
195 E A -2.9050
196 F A 0.0000
197 K A -1.9841
198 C A 0.0000
199 R A -1.9022
200 V A 0.0000
201 N A -1.3791
202 S A 0.0000
203 A A -0.4781
204 A A -0.3032
205 F A -0.0207
206 P A -0.3329
207 A A -0.2558
208 P A -0.8413
209 I A -0.8686
210 E A -2.2555
211 K A -1.2715
212 T A -1.0709
213 I A -0.3670
214 S A -1.3553
215 K A -1.5199
216 T A -1.4502
217 K A -2.5021
218 G A -2.2636
219 R A -2.5538
220 P A -1.6699
221 K A -1.2674
222 A A -1.0410
223 P A 0.0000
224 Q A -0.9915
225 V A 0.0000
226 Y A 1.0008
227 T A 0.5825
228 I A 0.7860
229 P A -0.1974
230 P A -1.0649
231 P A -1.6037
232 K A -2.7202
233 E A -2.9893
234 Q A -2.6129
235 M A -2.4400
236 A A -2.0901
237 K A -3.3518
238 D A -3.6407
239 K A -3.4433
240 V A 0.0000
241 S A -1.0720
242 L A 0.0000
243 T A -0.2036
244 C A 0.0000
245 M A 0.7726
246 I A 0.0000
247 T A -0.1419
248 D A -1.1255
249 F A 0.0000
250 F A -1.0184
251 P A 0.0000
252 E A -1.0154
253 D A -1.4742
254 I A -0.7990
255 T A -0.8703
256 V A 0.0000
257 E A -1.7895
258 W A 0.0000
259 Q A -1.6200
260 W A -0.9571
261 N A -1.3935
262 G A -1.4459
263 Q A -1.9230
264 P A -1.6450
265 A A -1.9074
266 E A -2.9546
267 N A -2.7687
268 Y A -2.6594
269 K A -3.1047
270 N A -2.0161
271 T A -1.1885
272 Q A -1.3224
273 P A -0.4081
274 I A 0.5318
275 M A 0.1665
276 D A -1.1101
277 T A -1.2322
278 D A -2.1796
279 G A -1.1003
280 S A 0.0000
281 Y A -0.3924
282 F A 0.1342
283 V A 0.0000
284 Y A 0.0902
285 S A 0.0000
286 K A -2.0488
287 L A 0.0000
288 N A -2.3067
289 V A 0.0000
290 Q A -3.1455
291 K A -3.0855
292 S A -2.1522
293 N A -1.7646
294 W A 0.0000
295 E A -2.4206
296 A A -1.3197
297 G A -1.2057
298 N A -0.9599
299 T A -0.6117
300 F A 0.0000
301 T A -1.2978
302 C A 0.0000
303 S A 0.0000
304 V A 0.0000
305 L A 0.0000
306 H A 0.0000
307 E A -0.8630
308 G A -1.0710
309 L A -1.2794
310 H A -1.8041
311 N A -2.0304
312 H A -1.4819
313 H A -1.5556
314 T A -1.6616
315 E A -2.0479
316 K A -1.4632
317 S A -0.8604
318 L A 0.0000
319 S A -0.7250
320 H A -1.1994
321 S A -1.1957
322 P A -1.3717
323 G A -1.5116
324 K A -2.0231
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Laboratory of Theory of Biopolymers 2018