| Chain sequence(s) |
B: SFADRLKAALAKVKALAAEEKAAGNEELAAALEKMAKLLEAKLKEVEALL
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:39)
[INFO] Main: Simulation completed successfully. (00:01:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -0.3994 | |
| 2 | F | B | 0.2089 | |
| 3 | A | B | -1.7502 | |
| 4 | D | B | -2.9389 | |
| 5 | R | B | -2.6023 | |
| 6 | L | B | 0.0000 | |
| 7 | K | B | -3.2323 | |
| 8 | A | B | -2.2736 | |
| 9 | A | B | -2.0417 | |
| 10 | L | B | 0.0000 | |
| 11 | A | B | -1.8325 | |
| 12 | K | B | -2.1041 | |
| 13 | V | B | -1.9761 | |
| 14 | K | B | -2.6553 | |
| 15 | A | B | -1.8283 | |
| 16 | L | B | -1.3579 | |
| 17 | A | B | -2.4263 | |
| 18 | A | B | -2.3145 | |
| 19 | E | B | -2.5402 | |
| 20 | E | B | -2.7984 | |
| 21 | K | B | -3.3509 | |
| 22 | A | B | -1.9899 | |
| 23 | A | B | -1.7151 | |
| 24 | G | B | -2.3518 | |
| 25 | N | B | -2.9628 | |
| 26 | E | B | -3.4386 | |
| 27 | E | B | -2.9192 | |
| 28 | L | B | -1.6345 | |
| 29 | A | B | 0.0000 | |
| 30 | A | B | -2.0559 | |
| 31 | A | B | -1.3837 | |
| 32 | L | B | -1.7494 | |
| 33 | E | B | -2.6049 | |
| 34 | K | B | -2.4720 | |
| 35 | M | B | -1.1281 | |
| 36 | A | B | 0.0000 | |
| 37 | K | B | -2.3331 | |
| 38 | L | B | -0.4995 | |
| 39 | L | B | -1.3417 | |
| 40 | E | B | -2.1877 | |
| 41 | A | B | -1.8179 | |
| 42 | K | B | -2.4454 | |
| 43 | L | B | 0.0000 | |
| 44 | K | B | -3.2482 | |
| 45 | E | B | -2.8921 | |
| 46 | V | B | -1.1721 | |
| 47 | E | B | -1.9399 | |
| 48 | A | B | -0.8014 | |
| 49 | L | B | 1.0711 | |
| 50 | L | B | 1.2664 |