| Chain sequence(s) |
A: APLSCGRNGGVCIPIRCPVPMRQIGTCFGRPVKCCRSW
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:11)
[INFO] Main: Simulation completed successfully. (00:00:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.5878 | |
| 2 | P | A | 1.0136 | |
| 3 | L | A | 1.9430 | |
| 4 | S | A | 0.5300 | |
| 5 | C | A | 0.0084 | |
| 6 | G | A | -1.0971 | |
| 7 | R | A | -2.3546 | |
| 8 | N | A | -1.3491 | |
| 9 | G | A | -0.9610 | |
| 10 | G | A | 0.1080 | |
| 11 | V | A | 1.5746 | |
| 12 | C | A | 1.3343 | |
| 13 | I | A | 0.6469 | |
| 14 | P | A | 0.5180 | |
| 15 | I | A | 0.8705 | |
| 16 | R | A | -0.8432 | |
| 17 | C | A | -0.3445 | |
| 18 | P | A | 0.3299 | |
| 19 | V | A | 1.1066 | |
| 20 | P | A | 0.5832 | |
| 21 | M | A | 0.2983 | |
| 22 | R | A | -0.9699 | |
| 23 | Q | A | -0.8308 | |
| 24 | I | A | -0.1858 | |
| 25 | G | A | -0.7773 | |
| 26 | T | A | -0.0907 | |
| 27 | C | A | 0.0000 | |
| 28 | F | A | 1.0535 | |
| 29 | G | A | -0.3942 | |
| 30 | R | A | -1.5489 | |
| 31 | P | A | -0.6074 | |
| 32 | V | A | 0.3372 | |
| 33 | K | A | -0.0326 | |
| 34 | C | A | 0.0000 | |
| 35 | C | A | 0.0000 | |
| 36 | R | A | 0.0980 | |
| 37 | S | A | 0.1324 | |
| 38 | W | A | 0.8070 |