Project name: query_structure

Status: done

Started: 2026-03-16 22:54:23
Settings
Chain sequence(s) A: APLSCGRNGGVCIPIRCPVPMRQIGTCFGRPVKCCRSW
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:11)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:11)
Show buried residues

Minimal score value
-2.3546
Maximal score value
1.943
Average score
0.0393
Total score value
1.4941

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A 0.5878
2 P A 1.0136
3 L A 1.9430
4 S A 0.5300
5 C A 0.0084
6 G A -1.0971
7 R A -2.3546
8 N A -1.3491
9 G A -0.9610
10 G A 0.1080
11 V A 1.5746
12 C A 1.3343
13 I A 0.6469
14 P A 0.5180
15 I A 0.8705
16 R A -0.8432
17 C A -0.3445
18 P A 0.3299
19 V A 1.1066
20 P A 0.5832
21 M A 0.2983
22 R A -0.9699
23 Q A -0.8308
24 I A -0.1858
25 G A -0.7773
26 T A -0.0907
27 C A 0.0000
28 F A 1.0535
29 G A -0.3942
30 R A -1.5489
31 P A -0.6074
32 V A 0.3372
33 K A -0.0326
34 C A 0.0000
35 C A 0.0000
36 R A 0.0980
37 S A 0.1324
38 W A 0.8070
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Laboratory of Theory of Biopolymers 2018