| Chain sequence(s) |
I: DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYFCQHFDHLPLAFGGGTKVEIK
J: QVQLQESGPGLVKPSETLSLTCTVSGGSVSSGDYYWTWIRQSPGKGLEWIGHIYYSGNTNYNPSLKSRLTISIDTSKTQFSLKLSSVTAADTAIYYCVRDRVTGAFDIWGQGTMVTVSS input PDB |
| Selected Chain(s) | I,J |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:32)
[INFO] Main: Simulation completed successfully. (00:01:33)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | I | -2.1444 | |
| 2 | I | I | 0.0000 | |
| 3 | Q | I | -1.9462 | |
| 4 | M | I | -1.1389 | |
| 5 | T | I | -0.9736 | |
| 6 | Q | I | 0.0000 | |
| 7 | S | I | -0.6134 | |
| 8 | P | I | -0.5838 | |
| 9 | S | I | -0.8264 | |
| 10 | S | I | -1.1170 | |
| 11 | L | I | -0.8254 | |
| 12 | S | I | -0.9492 | |
| 13 | A | I | -1.2004 | |
| 14 | S | I | -1.0565 | |
| 15 | V | I | -0.4100 | |
| 16 | G | I | -1.0607 | |
| 17 | D | I | -1.9616 | |
| 18 | R | I | -2.4784 | |
| 19 | V | I | 0.0000 | |
| 20 | T | I | -0.6540 | |
| 21 | I | I | 0.0000 | |
| 22 | T | I | -0.6942 | |
| 23 | C | I | 0.0000 | |
| 24 | Q | I | -1.9530 | |
| 25 | A | I | 0.0000 | |
| 26 | S | I | -1.9081 | |
| 27 | Q | I | -2.3777 | |
| 28 | D | I | -2.6095 | |
| 29 | I | I | 0.0000 | |
| 30 | S | I | -1.2067 | |
| 31 | N | I | -1.0450 | |
| 32 | Y | I | -0.2740 | |
| 33 | L | I | 0.0000 | |
| 34 | N | I | 0.0000 | |
| 35 | W | I | 0.0000 | |
| 36 | Y | I | 0.0000 | |
| 37 | Q | I | 0.0000 | |
| 38 | Q | I | -1.5540 | |
| 39 | K | I | -1.9924 | |
| 40 | P | I | -1.2511 | |
| 41 | G | I | -1.7619 | |
| 42 | K | I | -2.7252 | |
| 43 | A | I | -1.7428 | |
| 44 | P | I | 0.0000 | |
| 45 | K | I | -1.8937 | |
| 46 | L | I | 0.0000 | |
| 47 | L | I | 0.0000 | |
| 48 | I | I | 0.0000 | |
| 49 | Y | I | -0.4266 | |
| 50 | D | I | -0.9749 | |
| 51 | A | I | 0.0000 | |
| 52 | S | I | -0.9628 | |
| 53 | N | I | -1.0893 | |
| 54 | L | I | -0.2472 | |
| 55 | E | I | -0.5234 | |
| 56 | T | I | -0.4095 | |
| 57 | G | I | -0.5232 | |
| 58 | V | I | 0.0000 | |
| 59 | P | I | -0.3870 | |
| 60 | S | I | -0.4526 | |
| 61 | R | I | -0.8088 | |
| 62 | F | I | 0.0000 | |
| 63 | S | I | -0.4988 | |
| 64 | G | I | -0.5376 | |
| 65 | S | I | -1.0164 | |
| 66 | G | I | -1.1550 | |
| 67 | S | I | -1.3197 | |
| 68 | G | I | -1.7138 | |
| 69 | T | I | -2.1307 | |
| 70 | D | I | -2.6080 | |
| 71 | F | I | 0.0000 | |
| 72 | T | I | -0.7421 | |
| 73 | F | I | 0.0000 | |
| 74 | T | I | -0.6161 | |
| 75 | I | I | 0.0000 | |
| 76 | S | I | -1.4781 | |
| 77 | S | I | -1.3071 | |
| 78 | L | I | 0.0000 | |
| 79 | Q | I | -1.0319 | |
| 80 | P | I | -1.2046 | |
| 81 | E | I | -1.8834 | |
| 82 | D | I | 0.0000 | |
| 83 | I | I | -0.7459 | |
| 84 | A | I | 0.0000 | |
| 85 | T | I | -1.0726 | |
| 86 | Y | I | 0.0000 | |
| 87 | F | I | 0.0000 | |
| 88 | C | I | 0.0000 | |
| 89 | Q | I | 0.0000 | |
| 90 | H | I | 0.0000 | |
| 91 | F | I | -0.0044 | |
| 92 | D | I | -0.7642 | |
| 93 | H | I | -0.4883 | |
| 94 | L | I | 0.0336 | |
| 95 | P | I | -0.2787 | |
| 96 | L | I | 0.0000 | |
| 97 | A | I | -0.5335 | |
| 98 | F | I | 0.0000 | |
| 99 | G | I | 0.0000 | |
| 100 | G | I | -1.0363 | |
| 101 | G | I | -0.7959 | |
| 102 | T | I | 0.0000 | |
| 103 | K | I | -1.9513 | |
| 104 | V | I | 0.0000 | |
| 105 | E | I | -1.8382 | |
| 106 | I | I | -1.0889 | |
| 107 | K | I | -1.6333 | |
| 1 | Q | J | -1.5756 | |
| 2 | V | J | -1.2728 | |
| 3 | Q | J | -1.9709 | |
| 4 | L | J | 0.0000 | |
| 5 | Q | J | -1.8503 | |
| 6 | E | J | 0.0000 | |
| 7 | S | J | -0.6594 | |
| 8 | G | J | -0.4328 | |
| 9 | P | J | 0.0024 | |
| 10 | G | J | 0.5103 | |
| 11 | L | J | 0.9814 | |
| 12 | V | J | 0.0000 | |
| 13 | K | J | -1.7793 | |
| 14 | P | J | -1.3736 | |
| 15 | S | J | -1.4497 | |
| 16 | E | J | -2.0815 | |
| 17 | T | J | -1.4843 | |
| 18 | L | J | 0.0000 | |
| 19 | S | J | -0.9426 | |
| 20 | L | J | 0.0000 | |
| 21 | T | J | -0.6666 | |
| 22 | C | J | 0.0000 | |
| 23 | T | J | -1.1539 | |
| 24 | V | J | 0.0000 | |
| 25 | S | J | -1.4871 | |
| 26 | G | J | -1.2747 | |
| 27 | G | J | -0.9917 | |
| 28 | S | J | -0.7467 | |
| 29 | V | J | 0.0000 | |
| 30 | S | J | -0.3061 | |
| 31 | S | J | -0.5415 | |
| 32 | G | J | -0.5369 | |
| 33 | D | J | -1.3133 | |
| 34 | Y | J | -0.1341 | |
| 35 | Y | J | 0.3228 | |
| 36 | W | J | 0.0000 | |
| 37 | T | J | 0.0000 | |
| 38 | W | J | 0.0000 | |
| 39 | I | J | 0.0000 | |
| 40 | R | J | 0.0000 | |
| 41 | Q | J | -0.3881 | |
| 42 | S | J | -0.5800 | |
| 43 | P | J | -0.8683 | |
| 44 | G | J | -1.2455 | |
| 45 | K | J | -1.7426 | |
| 46 | G | J | -1.1550 | |
| 47 | L | J | 0.0000 | |
| 48 | E | J | -0.6281 | |
| 49 | W | J | 0.0000 | |
| 50 | I | J | 0.0000 | |
| 51 | G | J | 0.0000 | |
| 52 | H | J | 0.0000 | |
| 53 | I | J | 0.0000 | |
| 54 | Y | J | 0.0679 | |
| 55 | Y | J | 0.3373 | |
| 56 | S | J | -0.2699 | |
| 57 | G | J | -0.7467 | |
| 58 | N | J | -1.4060 | |
| 59 | T | J | -0.8394 | |
| 60 | N | J | -0.8576 | |
| 61 | Y | J | -0.7082 | |
| 62 | N | J | 0.0000 | |
| 63 | P | J | -1.1872 | |
| 64 | S | J | -0.8752 | |
| 65 | L | J | 0.0000 | |
| 66 | K | J | -2.0748 | |
| 67 | S | J | -1.3209 | |
| 68 | R | J | -1.3740 | |
| 69 | L | J | 0.0000 | |
| 70 | T | J | -0.9672 | |
| 71 | I | J | 0.0000 | |
| 72 | S | J | -0.4665 | |
| 73 | I | J | -0.2602 | |
| 74 | D | J | -1.1342 | |
| 75 | T | J | -0.9366 | |
| 76 | S | J | -1.3515 | |
| 77 | K | J | -2.0890 | |
| 78 | T | J | -1.3868 | |
| 79 | Q | J | -1.1716 | |
| 80 | F | J | 0.0000 | |
| 81 | S | J | -0.5435 | |
| 82 | L | J | 0.0000 | |
| 83 | K | J | -1.4067 | |
| 84 | L | J | 0.0000 | |
| 85 | S | J | -1.1914 | |
| 86 | S | J | -1.1884 | |
| 87 | V | J | 0.0000 | |
| 88 | T | J | -0.6279 | |
| 89 | A | J | -0.2324 | |
| 90 | A | J | -0.2020 | |
| 91 | D | J | 0.0000 | |
| 92 | T | J | 0.3422 | |
| 93 | A | J | 0.0000 | |
| 94 | I | J | 0.7044 | |
| 95 | Y | J | 0.0000 | |
| 96 | Y | J | 0.0000 | |
| 97 | C | J | 0.0000 | |
| 98 | V | J | 0.0000 | |
| 99 | R | J | 0.0000 | |
| 100 | D | J | 0.0000 | |
| 101 | R | J | -0.1620 | |
| 102 | V | J | 0.4826 | |
| 103 | T | J | 0.1051 | |
| 104 | G | J | 0.2386 | |
| 105 | A | J | 0.0000 | |
| 106 | F | J | 0.0000 | |
| 107 | D | J | -0.4313 | |
| 108 | I | J | -0.5694 | |
| 109 | W | J | -0.9214 | |
| 110 | G | J | 0.0000 | |
| 111 | Q | J | -1.9466 | |
| 112 | G | J | 0.0000 | |
| 113 | T | J | -0.0256 | |
| 114 | M | J | 1.0572 | |
| 115 | V | J | 0.0000 | |
| 116 | T | J | 0.4512 | |
| 117 | V | J | 0.0000 | |
| 118 | S | J | -0.4318 | |
| 119 | S | J | -0.6372 |