| Chain sequence(s) |
A: GKITLYEDRGFQGRYECSSDPNLQPYLSRCNARVDSGCWMLYEQPNYSGLQYFLRRGDYADQQWMGLSDSVRSCRLIPSGSRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEISLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRVIDFS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:57)
[INFO] Main: Simulation completed successfully. (00:01:58)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.2967 | |
| 2 | K | A | -2.0470 | |
| 3 | I | A | 0.0000 | |
| 4 | T | A | -1.3935 | |
| 5 | L | A | 0.0000 | |
| 6 | Y | A | -1.9585 | |
| 7 | E | A | -2.9888 | |
| 8 | D | A | -3.9537 | |
| 9 | R | A | -3.0423 | |
| 10 | G | A | -1.3403 | |
| 11 | F | A | -0.5034 | |
| 12 | Q | A | -2.3892 | |
| 13 | G | A | -2.8441 | |
| 14 | R | A | -2.4863 | |
| 16 | Y | A | -0.3278 | |
| 17 | E | A | -1.7024 | |
| 18 | C | A | 0.0000 | |
| 19 | S | A | -1.5188 | |
| 20 | S | A | -1.3097 | |
| 21 | D | A | -1.6628 | |
| 23 | P | A | -1.8919 | |
| 24 | N | A | -2.2680 | |
| 25 | L | A | 0.0000 | |
| 26 | Q | A | -1.5506 | |
| 27 | P | A | -0.5707 | |
| 28 | Y | A | -0.4275 | |
| 29 | L | A | 0.0000 | |
| 30 | S | A | -1.9764 | |
| 31 | R | A | -2.9130 | |
| 32 | C | A | 0.0000 | |
| 33 | N | A | -2.6453 | |
| 35 | A | A | 0.0000 | |
| 36 | R | A | -2.5125 | |
| 37 | V | A | 0.0000 | |
| 38 | D | A | -3.0296 | |
| 39 | S | A | -1.6532 | |
| 40 | G | A | -0.7552 | |
| 41 | C | A | 0.0000 | |
| 42 | W | A | 0.0000 | |
| 43 | M | A | 0.0000 | |
| 44 | L | A | 0.0000 | |
| 45 | Y | A | 0.0000 | |
| 46 | E | A | -1.5241 | |
| 47 | Q | A | -2.0390 | |
| 48 | P | A | -1.9710 | |
| 49 | N | A | -1.9028 | |
| 50 | Y | A | -1.1400 | |
| 51 | S | A | -0.9779 | |
| 52 | G | A | -0.9333 | |
| 53 | L | A | -0.3096 | |
| 54 | Q | A | -0.4735 | |
| 55 | Y | A | 0.0000 | |
| 56 | F | A | 0.1234 | |
| 57 | L | A | 0.0000 | |
| 58 | R | A | -0.8482 | |
| 59 | R | A | -1.9669 | |
| 60 | G | A | -2.0000 | |
| 61 | D | A | -2.8498 | |
| 62 | Y | A | -2.0487 | |
| 63 | A | A | -1.9417 | |
| 64 | D | A | -2.2160 | |
| 66 | Q | A | -1.6530 | |
| 67 | Q | A | -2.0161 | |
| 68 | W | A | 0.0000 | |
| 69 | M | A | -0.6481 | |
| 70 | G | A | -0.2193 | |
| 71 | L | A | 1.2020 | |
| 72 | S | A | -0.1883 | |
| 73 | D | A | -1.5880 | |
| 74 | S | A | -1.4002 | |
| 75 | V | A | 0.0000 | |
| 76 | R | A | -2.1410 | |
| 77 | S | A | 0.0000 | |
| 78 | C | A | 0.0000 | |
| 79 | R | A | -0.8891 | |
| 80 | L | A | -0.6810 | |
| 81 | I | A | 0.0000 | |
| 82 | P | A | -0.2571 | |
| 84 | S | A | -0.5910 | |
| 85 | G | A | -0.5973 | |
| 86 | S | A | -1.2485 | |
| 88 | R | A | -2.4595 | |
| 89 | I | A | 0.0000 | |
| 90 | R | A | -1.4242 | |
| 91 | L | A | 0.0000 | |
| 92 | Y | A | -2.2527 | |
| 93 | E | A | -2.5024 | |
| 94 | R | A | -3.6051 | |
| 95 | E | A | -3.4060 | |
| 96 | D | A | -3.7837 | |
| 97 | Y | A | -2.9887 | |
| 98 | R | A | -3.4802 | |
| 99 | G | A | -2.5352 | |
| 100 | Q | A | -1.9454 | |
| 101 | M | A | -1.2457 | |
| 102 | I | A | -1.3463 | |
| 103 | E | A | -2.4793 | |
| 104 | F | A | 0.0000 | |
| 105 | T | A | -2.2400 | |
| 106 | E | A | -2.7744 | |
| 107 | D | A | -1.7342 | |
| 108 | C | A | 0.0000 | |
| 109 | S | A | -1.4970 | |
| 110 | C | A | -1.2118 | |
| 111 | L | A | 0.0000 | |
| 112 | Q | A | -3.2183 | |
| 113 | D | A | -3.4445 | |
| 114 | R | A | -3.4659 | |
| 115 | F | A | 0.0000 | |
| 116 | R | A | -3.1312 | |
| 117 | F | A | -2.1681 | |
| 118 | N | A | -1.8371 | |
| 119 | E | A | -2.9158 | |
| 120 | I | A | 0.0000 | |
| 122 | S | A | 0.0000 | |
| 123 | L | A | 0.0000 | |
| 124 | N | A | -1.5376 | |
| 125 | V | A | 0.0000 | |
| 126 | L | A | -1.0831 | |
| 127 | E | A | -1.4398 | |
| 128 | G | A | -0.9419 | |
| 129 | S | A | 0.0000 | |
| 130 | W | A | 0.0000 | |
| 131 | V | A | 0.0000 | |
| 132 | L | A | 0.0000 | |
| 133 | Y | A | 0.0000 | |
| 134 | E | A | 0.0000 | |
| 135 | L | A | -0.7593 | |
| 136 | S | A | -0.9539 | |
| 137 | N | A | -1.6654 | |
| 138 | Y | A | -1.4824 | |
| 139 | R | A | -2.1998 | |
| 140 | G | A | -1.4032 | |
| 141 | R | A | -1.5233 | |
| 142 | Q | A | 0.0000 | |
| 143 | Y | A | 0.0000 | |
| 144 | L | A | 0.0000 | |
| 145 | L | A | 0.0000 | |
| 146 | M | A | -0.3335 | |
| 147 | P | A | -0.9427 | |
| 148 | G | A | -1.2520 | |
| 149 | D | A | -2.6844 | |
| 150 | Y | A | -2.6847 | |
| 151 | R | A | -3.7794 | |
| 152 | R | A | -3.8136 | |
| 153 | Y | A | -2.6844 | |
| 154 | Q | A | -2.8991 | |
| 155 | D | A | -3.2894 | |
| 156 | W | A | 0.0000 | |
| 157 | G | A | -1.6655 | |
| 158 | A | A | 0.0000 | |
| 159 | T | A | -1.3036 | |
| 160 | N | A | -2.0774 | |
| 161 | A | A | -2.2884 | |
| 162 | R | A | -2.1105 | |
| 163 | V | A | 0.0000 | |
| 164 | G | A | 0.0000 | |
| 165 | S | A | 0.0000 | |
| 166 | L | A | 0.0000 | |
| 167 | R | A | -1.1708 | |
| 168 | R | A | -1.0554 | |
| 169 | V | A | 0.0000 | |
| 170 | I | A | 1.1441 | |
| 171 | D | A | 0.3432 | |
| 172 | F | A | 1.4918 | |
| 173 | S | A | 0.6436 |