| Chain sequence(s) |
A: QVQLVESGGGLVQAGGSLRLSCAASGFPVEAFHMRWYRQAPGKEREWVAAITSKGQHTFYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNVKDYGMWFMYYDYWGQGTQVTVS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:55)
[INFO] Main: Simulation completed successfully. (00:01:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.5221 | |
| 2 | V | A | -0.9702 | |
| 3 | Q | A | -0.9621 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.9313 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.6423 | |
| 8 | G | A | -1.0775 | |
| 9 | G | A | -0.8375 | |
| 10 | G | A | -0.0475 | |
| 11 | L | A | 1.0040 | |
| 12 | V | A | -0.0258 | |
| 13 | Q | A | -1.2500 | |
| 14 | A | A | -1.4454 | |
| 15 | G | A | -1.3549 | |
| 16 | G | A | -0.8861 | |
| 17 | S | A | -1.2211 | |
| 18 | L | A | -0.9203 | |
| 19 | R | A | -2.1736 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.5381 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.2190 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.7803 | |
| 26 | G | A | -1.1191 | |
| 27 | F | A | 0.0000 | |
| 28 | P | A | -0.8362 | |
| 29 | V | A | 0.0000 | |
| 30 | E | A | -1.6922 | |
| 31 | A | A | -0.9099 | |
| 32 | F | A | 0.0000 | |
| 33 | H | A | -0.8981 | |
| 34 | M | A | 0.0000 | |
| 35 | R | A | -0.1421 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | -0.4849 | |
| 38 | R | A | -1.2906 | |
| 39 | Q | A | -2.2317 | |
| 40 | A | A | -2.1182 | |
| 41 | P | A | -1.4838 | |
| 42 | G | A | -2.0004 | |
| 43 | K | A | -3.4372 | |
| 44 | E | A | -3.6771 | |
| 45 | R | A | -2.9859 | |
| 46 | E | A | -1.8522 | |
| 47 | W | A | -0.5724 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | T | A | -1.3167 | |
| 53 | S | A | -1.6576 | |
| 54 | K | A | -2.6604 | |
| 55 | G | A | -2.2583 | |
| 56 | Q | A | -2.2259 | |
| 57 | H | A | -1.6780 | |
| 58 | T | A | -0.3216 | |
| 59 | F | A | 0.4179 | |
| 60 | Y | A | -0.3610 | |
| 61 | A | A | -1.0895 | |
| 62 | D | A | -2.3230 | |
| 63 | S | A | -1.7885 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.5001 | |
| 66 | G | A | -1.7978 | |
| 67 | R | A | -1.5256 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.7517 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.7860 | |
| 72 | R | A | -1.9127 | |
| 73 | D | A | -2.0574 | |
| 74 | N | A | -2.2692 | |
| 75 | A | A | -1.5883 | |
| 76 | K | A | -2.3610 | |
| 77 | N | A | -1.8735 | |
| 78 | T | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | 0.0000 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.2727 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -1.4466 | |
| 85 | S | A | -1.2468 | |
| 86 | L | A | 0.0000 | |
| 87 | K | A | -2.4313 | |
| 88 | P | A | -1.9621 | |
| 89 | E | A | -2.3860 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -1.0061 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | -0.7022 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | -0.2502 | |
| 96 | C | A | 0.0000 | |
| 97 | N | A | 0.0000 | |
| 98 | V | A | 0.0000 | |
| 99 | K | A | -0.5161 | |
| 100 | D | A | 0.5680 | |
| 101 | Y | A | 1.6166 | |
| 102 | G | A | 1.3303 | |
| 103 | M | A | 2.1119 | |
| 104 | W | A | 2.2567 | |
| 105 | F | A | 2.2339 | |
| 106 | M | A | 2.5233 | |
| 107 | Y | A | 2.3874 | |
| 108 | Y | A | 1.4500 | |
| 109 | D | A | -0.4006 | |
| 110 | Y | A | -0.1300 | |
| 111 | W | A | 0.0449 | |
| 112 | G | A | -0.1890 | |
| 113 | Q | A | -0.9347 | |
| 114 | G | A | 0.0000 | |
| 115 | T | A | 0.0000 | |
| 116 | Q | A | -1.1945 | |
| 117 | V | A | 0.0000 | |
| 118 | T | A | -0.3277 | |
| 119 | V | A | 0.0000 | |
| 120 | S | A | -0.7684 |