| Chain sequence(s) |
A: EPTSCQTSYVESSPCQTSCYRPRTSLLCSPCQTTYSGSLGFGSSSCRSLGYGSRSCYVGCGSSGFRSLGYGGCGFPSLSYGSRFCRPTYLASRS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:25)
[INFO] Main: Simulation completed successfully. (00:00:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.9860 | |
| 2 | P | A | -1.1335 | |
| 3 | T | A | -0.7029 | |
| 4 | S | A | -0.5121 | |
| 5 | C | A | -0.0555 | |
| 6 | Q | A | -0.8368 | |
| 7 | T | A | -0.0686 | |
| 8 | S | A | 0.2853 | |
| 9 | Y | A | 1.1505 | |
| 10 | V | A | 1.0194 | |
| 11 | E | A | -1.0261 | |
| 12 | S | A | -0.4952 | |
| 13 | S | A | -0.8755 | |
| 14 | P | A | -0.9402 | |
| 15 | C | A | -0.1925 | |
| 16 | Q | A | -1.0046 | |
| 17 | T | A | 0.1241 | |
| 18 | S | A | 0.7266 | |
| 19 | C | A | 1.2117 | |
| 20 | Y | A | 1.1651 | |
| 21 | R | A | -0.7819 | |
| 22 | P | A | -1.2620 | |
| 23 | R | A | -2.0500 | |
| 24 | T | A | -0.9085 | |
| 25 | S | A | 0.2535 | |
| 26 | L | A | 1.7392 | |
| 27 | L | A | 2.3161 | |
| 28 | C | A | 1.5091 | |
| 29 | S | A | 0.3548 | |
| 30 | P | A | -0.4260 | |
| 31 | C | A | -0.2585 | |
| 32 | Q | A | -1.0301 | |
| 33 | T | A | -0.1987 | |
| 34 | T | A | 0.1121 | |
| 35 | Y | A | 0.9619 | |
| 36 | S | A | 0.4367 | |
| 37 | G | A | 0.0458 | |
| 38 | S | A | 0.4943 | |
| 39 | L | A | 1.4262 | |
| 40 | G | A | 0.9086 | |
| 41 | F | A | 1.7023 | |
| 42 | G | A | 0.3419 | |
| 43 | S | A | 0.4526 | |
| 44 | S | A | 0.2837 | |
| 45 | S | A | -0.1009 | |
| 46 | C | A | -0.1969 | |
| 47 | R | A | -1.5899 | |
| 48 | S | A | -0.5995 | |
| 49 | L | A | 0.8041 | |
| 50 | G | A | 0.3111 | |
| 51 | Y | A | 0.8729 | |
| 52 | G | A | -0.3187 | |
| 53 | S | A | -0.9658 | |
| 54 | R | A | -1.7994 | |
| 55 | S | A | -0.6473 | |
| 56 | C | A | 0.5488 | |
| 57 | Y | A | 1.9940 | |
| 58 | V | A | 2.3520 | |
| 59 | G | A | 1.2792 | |
| 60 | C | A | 0.9734 | |
| 61 | G | A | -0.2365 | |
| 62 | S | A | -0.4588 | |
| 63 | S | A | -0.5558 | |
| 64 | G | A | -0.3448 | |
| 65 | F | A | 0.8518 | |
| 66 | R | A | -0.7068 | |
| 67 | S | A | 0.2612 | |
| 68 | L | A | 1.5267 | |
| 69 | G | A | 0.6177 | |
| 70 | Y | A | 1.5115 | |
| 71 | G | A | 1.1488 | |
| 72 | G | A | 1.0706 | |
| 73 | C | A | 1.4868 | |
| 74 | G | A | 1.1161 | |
| 75 | F | A | 2.2530 | |
| 76 | P | A | 1.0946 | |
| 77 | S | A | 1.1033 | |
| 78 | L | A | 1.8279 | |
| 79 | S | A | 0.6433 | |
| 80 | Y | A | 1.1206 | |
| 81 | G | A | 0.0216 | |
| 82 | S | A | -0.1486 | |
| 83 | R | A | -0.9724 | |
| 84 | F | A | 0.7864 | |
| 85 | C | A | 0.1736 | |
| 86 | R | A | -0.9906 | |
| 87 | P | A | 0.0355 | |
| 88 | T | A | 0.5213 | |
| 89 | Y | A | 1.7060 | |
| 90 | L | A | 1.6425 | |
| 91 | A | A | 0.4534 | |
| 92 | S | A | -0.5424 | |
| 93 | R | A | -1.8396 | |
| 94 | S | A | -1.1548 |