Chain sequence(s) |
H: QVQLQESGGGLVQPGGSLRLSCVLSNGIFSTYGMNWYRQAPGKQREFVASITSSGSTNYSPSVKGRFTISRENAKSTVNLQMNNLNPEDTAVYYCNTWSTWGQGTQVTVSS
input PDB |
Selected Chain(s) | H |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:23) [INFO] Main: Simulation completed successfully. (00:00:24) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.6490 | |
2 | V | H | -0.9525 | |
3 | Q | H | -1.8608 | |
4 | L | H | 0.0000 | |
5 | Q | H | -1.2860 | |
6 | E | H | 0.0000 | |
7 | S | H | -0.9967 | |
8 | G | H | -1.2045 | |
9 | G | H | -0.6397 | |
11 | G | H | 0.1111 | |
12 | L | H | 1.1562 | |
13 | V | H | 0.1053 | |
14 | Q | H | -1.3375 | |
15 | P | H | -1.7074 | |
16 | G | H | -1.6867 | |
17 | G | H | -1.1157 | |
18 | S | H | -1.3212 | |
19 | L | H | -0.9765 | |
20 | R | H | -2.1264 | |
21 | L | H | 0.0000 | |
22 | S | H | -0.6623 | |
23 | C | H | 0.0000 | |
24 | V | H | 0.1307 | |
25 | L | H | 0.0000 | |
26 | S | H | -1.0344 | |
27 | N | H | -1.2620 | |
28 | G | H | -0.3470 | |
29 | I | H | 1.4612 | |
30 | F | H | 0.0000 | |
35 | S | H | -0.2573 | |
36 | T | H | 0.2825 | |
37 | Y | H | 0.6260 | |
38 | G | H | 0.0367 | |
39 | M | H | 0.0000 | |
40 | N | H | 0.2471 | |
41 | W | H | 0.0000 | |
42 | Y | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -1.6331 | |
45 | A | H | 0.0000 | |
46 | P | H | -1.4678 | |
47 | G | H | -1.7960 | |
48 | K | H | -2.9744 | |
49 | Q | H | -2.7509 | |
50 | R | H | -2.0885 | |
51 | E | H | -1.4911 | |
52 | F | H | -0.0855 | |
53 | V | H | 0.0000 | |
54 | A | H | 0.0000 | |
55 | S | H | -0.3497 | |
56 | I | H | 0.0000 | |
57 | T | H | -0.6332 | |
58 | S | H | -0.6729 | |
59 | S | H | -0.6520 | |
63 | G | H | -0.9473 | |
64 | S | H | -0.8010 | |
65 | T | H | -0.9204 | |
66 | N | H | -1.5935 | |
67 | Y | H | -1.0469 | |
68 | S | H | -0.8197 | |
69 | P | H | -1.0375 | |
70 | S | H | -0.9779 | |
71 | V | H | 0.0000 | |
72 | K | H | -2.2697 | |
74 | G | H | -1.6491 | |
75 | R | H | -1.6141 | |
76 | F | H | 0.0000 | |
77 | T | H | -1.0125 | |
78 | I | H | 0.0000 | |
79 | S | H | -0.6029 | |
80 | R | H | -1.1960 | |
81 | E | H | -1.5978 | |
82 | N | H | -1.4405 | |
83 | A | H | -1.3822 | |
84 | K | H | -2.0086 | |
85 | S | H | -0.8510 | |
86 | T | H | -0.7536 | |
87 | V | H | 0.0000 | |
88 | N | H | -0.7858 | |
89 | L | H | 0.0000 | |
90 | Q | H | -1.2309 | |
91 | M | H | 0.0000 | |
92 | N | H | -1.6576 | |
93 | N | H | -2.1009 | |
94 | L | H | 0.0000 | |
95 | N | H | -1.8237 | |
96 | P | H | -1.5629 | |
97 | E | H | -2.1203 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.7191 | |
100 | A | H | 0.0000 | |
101 | V | H | -0.2841 | |
102 | Y | H | 0.0000 | |
103 | Y | H | -0.2543 | |
104 | C | H | 0.0000 | |
105 | N | H | 0.0000 | |
106 | T | H | 0.0000 | |
107 | W | H | 1.1289 | |
116 | S | H | 0.4596 | |
117 | T | H | 0.2452 | |
118 | W | H | 0.0659 | |
119 | G | H | -0.8010 | |
120 | Q | H | -1.5376 | |
121 | G | H | 0.0000 | |
122 | T | H | -0.8069 | |
123 | Q | H | -0.7076 | |
124 | V | H | 0.0000 | |
125 | T | H | -0.1050 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.6160 | |
128 | S | H | -0.7676 |