| Chain sequence(s) |
A: ACVGDGQRCASWSGPYCCDGYYCSCRSMPYCRCRNNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:17)
[INFO] Main: Simulation completed successfully. (00:00:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.5039 | |
| 2 | C | A | 0.3990 | |
| 3 | V | A | -0.6907 | |
| 4 | G | A | -1.7465 | |
| 5 | D | A | -3.2592 | |
| 6 | G | A | -2.8938 | |
| 7 | Q | A | -3.2144 | |
| 8 | R | A | -2.9941 | |
| 9 | C | A | 0.0000 | |
| 10 | A | A | -0.3331 | |
| 11 | S | A | 0.2237 | |
| 12 | W | A | 0.9214 | |
| 13 | S | A | 0.1102 | |
| 14 | G | A | -0.1406 | |
| 15 | P | A | 0.2451 | |
| 16 | Y | A | 1.4234 | |
| 17 | C | A | -0.0023 | |
| 18 | C | A | -0.4315 | |
| 19 | D | A | -1.4502 | |
| 20 | G | A | -1.1846 | |
| 21 | Y | A | -0.7570 | |
| 22 | Y | A | 0.1996 | |
| 23 | C | A | -0.7109 | |
| 24 | S | A | -0.8961 | |
| 25 | C | A | -0.5350 | |
| 26 | R | A | -1.6551 | |
| 27 | S | A | -0.6666 | |
| 28 | M | A | 0.1012 | |
| 29 | P | A | 0.3441 | |
| 30 | Y | A | 0.5139 | |
| 31 | C | A | 0.0000 | |
| 32 | R | A | -2.7788 | |
| 33 | C | A | 0.0000 | |
| 34 | R | A | -3.0975 | |
| 35 | N | A | -2.1942 | |
| 36 | N | A | -1.6318 | |
| 37 | S | A | -0.8611 |