| Chain sequence(s) |
A: MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVTTVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDQLGKNEEGAPQEGILEDMPVDPDNEAYEMPSEEGYQDYEPEA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:04)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:04)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:04)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:04)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:04)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:25)
[INFO] Main: Simulation completed successfully. (00:02:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.8407 | |
| 2 | D | A | 0.0838 | |
| 3 | V | A | 1.8138 | |
| 4 | F | A | 1.9626 | |
| 5 | M | A | 0.8057 | |
| 6 | K | A | -0.8530 | |
| 7 | G | A | -0.6581 | |
| 8 | L | A | -0.3578 | |
| 9 | S | A | -1.8919 | |
| 10 | K | A | -2.7982 | |
| 11 | A | A | -1.6857 | |
| 12 | K | A | -1.9480 | |
| 13 | E | A | -2.1535 | |
| 14 | G | A | -0.6656 | |
| 15 | V | A | 0.9282 | |
| 16 | V | A | 0.8509 | |
| 17 | A | A | -0.5522 | |
| 18 | A | A | -0.8480 | |
| 19 | A | A | -1.1231 | |
| 20 | E | A | -2.9638 | |
| 21 | K | A | -3.2229 | |
| 22 | T | A | -2.1466 | |
| 23 | K | A | -3.3185 | |
| 24 | Q | A | -3.2108 | |
| 25 | G | A | -1.9338 | |
| 26 | V | A | -0.3219 | |
| 27 | A | A | -1.4315 | |
| 28 | E | A | -2.5943 | |
| 29 | A | A | -1.4519 | |
| 30 | A | A | -1.4590 | |
| 31 | G | A | -2.4675 | |
| 32 | K | A | -3.0327 | |
| 33 | T | A | -2.0449 | |
| 34 | K | A | -2.5502 | |
| 35 | E | A | -1.4056 | |
| 36 | G | A | -0.3021 | |
| 37 | V | A | 1.6739 | |
| 38 | L | A | 2.1494 | |
| 39 | Y | A | 2.0180 | |
| 40 | V | A | 0.6298 | |
| 41 | G | A | -0.5366 | |
| 42 | S | A | -1.1458 | |
| 43 | K | A | -2.0406 | |
| 44 | T | A | -1.7697 | |
| 45 | K | A | -2.4769 | |
| 46 | E | A | -2.4472 | |
| 47 | G | A | -1.3640 | |
| 48 | V | A | 0.4059 | |
| 49 | V | A | 0.7704 | |
| 50 | H | A | -0.0640 | |
| 51 | G | A | 0.8498 | |
| 52 | V | A | 2.4259 | |
| 53 | T | A | 0.8249 | |
| 54 | T | A | 0.3941 | |
| 55 | V | A | 0.7945 | |
| 56 | A | A | -0.8177 | |
| 57 | E | A | -2.8977 | |
| 58 | K | A | -3.3710 | |
| 59 | T | A | -2.4490 | |
| 60 | K | A | -3.7015 | |
| 61 | E | A | -4.0492 | |
| 62 | Q | A | -2.9035 | |
| 63 | V | A | -0.5830 | |
| 64 | T | A | -1.5985 | |
| 65 | N | A | -1.5440 | |
| 66 | V | A | 0.5921 | |
| 67 | G | A | 0.4623 | |
| 68 | G | A | 0.6864 | |
| 69 | A | A | 1.5880 | |
| 70 | V | A | 3.0581 | |
| 71 | V | A | 3.0377 | |
| 72 | T | A | 1.9631 | |
| 73 | G | A | 2.1546 | |
| 74 | V | A | 2.9612 | |
| 75 | T | A | 1.4549 | |
| 76 | A | A | 0.9181 | |
| 77 | V | A | 1.3297 | |
| 78 | A | A | 0.3223 | |
| 79 | Q | A | -1.1706 | |
| 80 | K | A | -1.5494 | |
| 81 | T | A | -0.6800 | |
| 82 | V | A | 0.0320 | |
| 83 | E | A | -1.7248 | |
| 84 | G | A | -0.9810 | |
| 85 | A | A | 0.0947 | |
| 86 | G | A | -0.1830 | |
| 87 | S | A | 0.3207 | |
| 88 | I | A | 1.4864 | |
| 89 | A | A | 0.9229 | |
| 90 | A | A | 1.2356 | |
| 91 | A | A | 1.2745 | |
| 92 | T | A | 1.0202 | |
| 93 | G | A | 0.9125 | |
| 94 | F | A | 1.8629 | |
| 95 | V | A | 1.1823 | |
| 96 | K | A | -1.7131 | |
| 97 | K | A | -2.7409 | |
| 98 | D | A | -3.0747 | |
| 99 | Q | A | -2.2090 | |
| 100 | L | A | -0.6707 | |
| 101 | G | A | -1.6529 | |
| 102 | K | A | -2.9237 | |
| 103 | N | A | -3.5657 | |
| 104 | E | A | -3.8963 | |
| 105 | E | A | -3.7178 | |
| 106 | G | A | -2.2185 | |
| 107 | A | A | -1.7389 | |
| 108 | P | A | -1.8909 | |
| 109 | Q | A | -2.4833 | |
| 110 | E | A | -2.4429 | |
| 111 | G | A | -0.7288 | |
| 112 | I | A | 1.3103 | |
| 113 | L | A | 0.6719 | |
| 114 | E | A | -1.3221 | |
| 115 | D | A | -0.8915 | |
| 116 | M | A | 0.3184 | |
| 117 | P | A | -0.1773 | |
| 118 | V | A | -0.3688 | |
| 119 | D | A | -2.4085 | |
| 120 | P | A | -2.4721 | |
| 121 | D | A | -3.0528 | |
| 122 | N | A | -2.7016 | |
| 123 | E | A | -2.8218 | |
| 124 | A | A | -1.3488 | |
| 125 | Y | A | -0.3259 | |
| 126 | E | A | -2.0035 | |
| 127 | M | A | -0.8312 | |
| 128 | P | A | -1.2908 | |
| 129 | S | A | -1.6607 | |
| 130 | E | A | -2.7938 | |
| 131 | E | A | -2.7542 | |
| 132 | G | A | -2.0398 | |
| 133 | Y | A | -0.6750 | |
| 134 | Q | A | -1.8112 | |
| 135 | D | A | -2.2074 | |
| 136 | Y | A | -1.0889 | |
| 137 | E | A | -2.3465 | |
| 138 | P | A | -1.8129 | |
| 139 | E | A | -2.0778 | |
| 140 | A | A | -1.1262 |