Project name: 909de68341cbb38

Status: done

Started: 2025-02-26 15:37:16
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Chain sequence(s) A: MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVTTVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDQLGKNEEGAPQEGILEDMPVDPDNEAYEMPSEEGYQDYEPEA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:04)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:04)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:04)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:04)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:04)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:25)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:26)
Show buried residues

Minimal score value
-4.0492
Maximal score value
3.0581
Average score
-0.8723
Total score value
-122.1249

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.8407
2 D A 0.0838
3 V A 1.8138
4 F A 1.9626
5 M A 0.8057
6 K A -0.8530
7 G A -0.6581
8 L A -0.3578
9 S A -1.8919
10 K A -2.7982
11 A A -1.6857
12 K A -1.9480
13 E A -2.1535
14 G A -0.6656
15 V A 0.9282
16 V A 0.8509
17 A A -0.5522
18 A A -0.8480
19 A A -1.1231
20 E A -2.9638
21 K A -3.2229
22 T A -2.1466
23 K A -3.3185
24 Q A -3.2108
25 G A -1.9338
26 V A -0.3219
27 A A -1.4315
28 E A -2.5943
29 A A -1.4519
30 A A -1.4590
31 G A -2.4675
32 K A -3.0327
33 T A -2.0449
34 K A -2.5502
35 E A -1.4056
36 G A -0.3021
37 V A 1.6739
38 L A 2.1494
39 Y A 2.0180
40 V A 0.6298
41 G A -0.5366
42 S A -1.1458
43 K A -2.0406
44 T A -1.7697
45 K A -2.4769
46 E A -2.4472
47 G A -1.3640
48 V A 0.4059
49 V A 0.7704
50 H A -0.0640
51 G A 0.8498
52 V A 2.4259
53 T A 0.8249
54 T A 0.3941
55 V A 0.7945
56 A A -0.8177
57 E A -2.8977
58 K A -3.3710
59 T A -2.4490
60 K A -3.7015
61 E A -4.0492
62 Q A -2.9035
63 V A -0.5830
64 T A -1.5985
65 N A -1.5440
66 V A 0.5921
67 G A 0.4623
68 G A 0.6864
69 A A 1.5880
70 V A 3.0581
71 V A 3.0377
72 T A 1.9631
73 G A 2.1546
74 V A 2.9612
75 T A 1.4549
76 A A 0.9181
77 V A 1.3297
78 A A 0.3223
79 Q A -1.1706
80 K A -1.5494
81 T A -0.6800
82 V A 0.0320
83 E A -1.7248
84 G A -0.9810
85 A A 0.0947
86 G A -0.1830
87 S A 0.3207
88 I A 1.4864
89 A A 0.9229
90 A A 1.2356
91 A A 1.2745
92 T A 1.0202
93 G A 0.9125
94 F A 1.8629
95 V A 1.1823
96 K A -1.7131
97 K A -2.7409
98 D A -3.0747
99 Q A -2.2090
100 L A -0.6707
101 G A -1.6529
102 K A -2.9237
103 N A -3.5657
104 E A -3.8963
105 E A -3.7178
106 G A -2.2185
107 A A -1.7389
108 P A -1.8909
109 Q A -2.4833
110 E A -2.4429
111 G A -0.7288
112 I A 1.3103
113 L A 0.6719
114 E A -1.3221
115 D A -0.8915
116 M A 0.3184
117 P A -0.1773
118 V A -0.3688
119 D A -2.4085
120 P A -2.4721
121 D A -3.0528
122 N A -2.7016
123 E A -2.8218
124 A A -1.3488
125 Y A -0.3259
126 E A -2.0035
127 M A -0.8312
128 P A -1.2908
129 S A -1.6607
130 E A -2.7938
131 E A -2.7542
132 G A -2.0398
133 Y A -0.6750
134 Q A -1.8112
135 D A -2.2074
136 Y A -1.0889
137 E A -2.3465
138 P A -1.8129
139 E A -2.0778
140 A A -1.1262
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Laboratory of Theory of Biopolymers 2018