| Chain sequence(s) |
B: LMDEIMKLTEEIKKAMEEAYKLLQEDPEKAEEELKKVKELSAELQKLFDA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:33)
[INFO] Main: Simulation completed successfully. (00:02:33)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | B | 1.3470 | |
| 2 | M | B | 0.6518 | |
| 3 | D | B | -1.5096 | |
| 4 | E | B | -1.7065 | |
| 5 | I | B | -0.4679 | |
| 6 | M | B | -0.7742 | |
| 7 | K | B | -2.7471 | |
| 8 | L | B | -2.2132 | |
| 9 | T | B | -2.2049 | |
| 10 | E | B | -3.6325 | |
| 11 | E | B | -3.3005 | |
| 12 | I | B | -3.0712 | |
| 13 | K | B | -3.9539 | |
| 14 | K | B | -3.8512 | |
| 15 | A | B | 0.0000 | |
| 16 | M | B | -2.3242 | |
| 17 | E | B | -2.7110 | |
| 18 | E | B | -2.7298 | |
| 19 | A | B | 0.0000 | |
| 20 | Y | B | -0.6564 | |
| 21 | K | B | -2.2312 | |
| 22 | L | B | -2.6100 | |
| 23 | L | B | -1.3178 | |
| 24 | Q | B | -1.8321 | |
| 25 | E | B | -2.9178 | |
| 26 | D | B | -2.7678 | |
| 27 | P | B | -2.7561 | |
| 28 | E | B | -3.8945 | |
| 29 | K | B | -4.4813 | |
| 30 | A | B | 0.0000 | |
| 31 | E | B | -3.9417 | |
| 32 | E | B | -4.6695 | |
| 33 | E | B | -3.6722 | |
| 34 | L | B | -2.8636 | |
| 35 | K | B | -4.0259 | |
| 36 | K | B | -3.4534 | |
| 37 | V | B | -3.3456 | |
| 38 | K | B | -3.5164 | |
| 39 | E | B | -3.6147 | |
| 40 | L | B | -2.8509 | |
| 41 | S | B | -2.3449 | |
| 42 | A | B | -2.2894 | |
| 43 | E | B | -2.5754 | |
| 44 | L | B | -1.7306 | |
| 45 | Q | B | -2.1216 | |
| 46 | K | B | -2.4967 | |
| 47 | L | B | -0.5761 | |
| 48 | F | B | 0.3444 | |
| 49 | D | B | -1.7799 | |
| 50 | A | B | -0.5710 |