| Chain sequence(s) |
A: MSYNCCSRNFSSRSCGGYLHYPASSCGFSYPSNLVYSTDLCSPSTCQLGSSLYRGCQEQTSCYRPRTSLLCSPCQTTYSGSLGFGSSSCRSLGYGSRSCYVGCGSSG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:25)
[INFO] Main: Simulation completed successfully. (00:00:25)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.2533 | |
| 2 | S | A | 0.7135 | |
| 3 | Y | A | 1.0905 | |
| 4 | N | A | -0.1691 | |
| 5 | C | A | 0.5136 | |
| 6 | C | A | 0.2221 | |
| 7 | S | A | -0.7975 | |
| 8 | R | A | -1.8593 | |
| 9 | N | A | -1.2804 | |
| 10 | F | A | 0.5020 | |
| 11 | S | A | -0.2886 | |
| 12 | S | A | -0.9058 | |
| 13 | R | A | -1.7316 | |
| 14 | S | A | -0.7666 | |
| 15 | C | A | -0.1005 | |
| 16 | G | A | -0.1227 | |
| 17 | G | A | 0.4025 | |
| 18 | Y | A | 1.5111 | |
| 19 | L | A | 1.8866 | |
| 20 | H | A | 0.6597 | |
| 21 | Y | A | 1.0602 | |
| 22 | P | A | 0.2656 | |
| 23 | A | A | 0.0910 | |
| 24 | S | A | -0.0915 | |
| 25 | S | A | 0.1018 | |
| 26 | C | A | 0.7799 | |
| 27 | G | A | 0.7023 | |
| 28 | F | A | 1.9991 | |
| 29 | S | A | 1.1987 | |
| 30 | Y | A | 1.4508 | |
| 31 | P | A | 0.3927 | |
| 32 | S | A | -0.1350 | |
| 33 | N | A | 0.0162 | |
| 34 | L | A | 2.0423 | |
| 35 | V | A | 2.6980 | |
| 36 | Y | A | 2.0888 | |
| 37 | S | A | 0.9475 | |
| 38 | T | A | -0.0262 | |
| 39 | D | A | -0.7690 | |
| 40 | L | A | 0.8736 | |
| 41 | C | A | 0.7429 | |
| 42 | S | A | 0.1645 | |
| 43 | P | A | 0.0121 | |
| 44 | S | A | -0.2970 | |
| 45 | T | A | -0.0707 | |
| 46 | C | A | 0.4338 | |
| 47 | Q | A | -0.2985 | |
| 48 | L | A | 0.8649 | |
| 49 | G | A | 0.0478 | |
| 50 | S | A | -0.0163 | |
| 51 | S | A | 0.5641 | |
| 52 | L | A | 1.4934 | |
| 53 | Y | A | 1.0989 | |
| 54 | R | A | -1.1020 | |
| 55 | G | A | -0.9962 | |
| 56 | C | A | -0.9834 | |
| 57 | Q | A | -2.4666 | |
| 58 | E | A | -2.8989 | |
| 59 | Q | A | -2.3030 | |
| 60 | T | A | -1.0804 | |
| 61 | S | A | -0.4425 | |
| 62 | C | A | 0.5507 | |
| 63 | Y | A | 0.3910 | |
| 64 | R | A | -1.7156 | |
| 65 | P | A | -1.6691 | |
| 66 | R | A | -2.2567 | |
| 67 | T | A | -0.8164 | |
| 68 | S | A | 0.5282 | |
| 69 | L | A | 2.0963 | |
| 70 | L | A | 2.4859 | |
| 71 | C | A | 1.7657 | |
| 72 | S | A | 0.6817 | |
| 73 | P | A | 0.1082 | |
| 74 | C | A | 0.0498 | |
| 75 | Q | A | -0.8196 | |
| 76 | T | A | -0.1513 | |
| 77 | T | A | 0.1712 | |
| 78 | Y | A | 0.8527 | |
| 79 | S | A | 0.3544 | |
| 80 | G | A | 0.1806 | |
| 81 | S | A | 0.6458 | |
| 82 | L | A | 1.4576 | |
| 83 | G | A | 1.0392 | |
| 84 | F | A | 1.7100 | |
| 85 | G | A | 0.5240 | |
| 86 | S | A | -0.1341 | |
| 87 | S | A | 0.1082 | |
| 88 | S | A | -0.1546 | |
| 89 | C | A | -0.1877 | |
| 90 | R | A | -1.4848 | |
| 91 | S | A | -0.5090 | |
| 92 | L | A | 0.6976 | |
| 93 | G | A | 0.2971 | |
| 94 | Y | A | 0.8821 | |
| 95 | G | A | -0.2081 | |
| 96 | S | A | -0.8434 | |
| 97 | R | A | -1.6496 | |
| 98 | S | A | -0.3058 | |
| 99 | C | A | 1.0126 | |
| 100 | Y | A | 2.2698 | |
| 101 | V | A | 2.3882 | |
| 102 | G | A | 0.9921 | |
| 103 | C | A | 0.7785 | |
| 104 | G | A | -0.2990 | |
| 105 | S | A | -0.5301 | |
| 106 | S | A | -0.5855 | |
| 107 | G | A | -0.6869 |