| Chain sequence(s) |
A: GTCNTPGCSCSSWPICTRNGLPTCGETCFG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:08)
[INFO] Main: Simulation completed successfully. (00:00:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | 0.0792 | |
| 2 | T | A | -0.0430 | |
| 3 | C | A | -0.5019 | |
| 4 | N | A | -1.2160 | |
| 5 | T | A | -1.0687 | |
| 6 | P | A | -0.9009 | |
| 7 | G | A | -1.1632 | |
| 8 | C | A | -1.0140 | |
| 9 | S | A | -0.6206 | |
| 10 | C | A | 0.1053 | |
| 11 | S | A | -0.1092 | |
| 12 | S | A | 0.4694 | |
| 13 | W | A | 1.2799 | |
| 14 | P | A | 0.8376 | |
| 15 | I | A | 0.9980 | |
| 16 | C | A | 0.0000 | |
| 17 | T | A | 0.0000 | |
| 18 | R | A | -1.3856 | |
| 19 | N | A | -1.6271 | |
| 20 | G | A | -0.7730 | |
| 21 | L | A | 0.4871 | |
| 22 | P | A | -0.0240 | |
| 23 | T | A | -0.2217 | |
| 24 | C | A | -0.5501 | |
| 25 | G | A | -0.4313 | |
| 26 | E | A | -0.3793 | |
| 27 | T | A | 0.2249 | |
| 28 | C | A | 0.0000 | |
| 29 | F | A | 0.7753 | |
| 30 | G | A | -0.0928 |