| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVNGKVLVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTEPVHETADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAPPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRSGPDGVPLPSDGPPSPLYVPPPPDSPYAVLPSYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPETNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9420 | |
| 2 | L | A | 1.9635 | |
| 3 | P | A | 0.8333 | |
| 4 | P | A | 0.3773 | |
| 5 | T | A | 0.1253 | |
| 6 | T | A | 0.1317 | |
| 7 | P | A | 0.1676 | |
| 8 | V | A | 1.2129 | |
| 9 | A | A | 0.0853 | |
| 10 | K | A | -1.0171 | |
| 11 | V | A | -0.1508 | |
| 12 | Q | A | -1.3924 | |
| 13 | S | A | -1.5426 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3982 | |
| 16 | E | A | -2.4278 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4627 | |
| 20 | P | A | 0.1317 | |
| 21 | T | A | 0.1808 | |
| 22 | S | A | -0.0942 | |
| 23 | L | A | 0.1032 | |
| 24 | F | A | -0.0116 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.3042 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9030 | |
| 31 | R | A | -2.6851 | |
| 32 | L | A | -0.8022 | |
| 33 | L | A | 1.1505 | |
| 34 | T | A | 1.3587 | |
| 35 | V | A | 1.8162 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2381 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6402 | |
| 40 | K | A | -1.6720 | |
| 41 | D | A | -0.6872 | |
| 42 | I | A | 1.2593 | |
| 43 | V | A | 2.2261 | |
| 44 | V | A | 1.6289 | |
| 45 | N | A | -0.5525 | |
| 46 | G | A | -0.3794 | |
| 47 | K | A | -0.1382 | |
| 48 | V | A | 2.0280 | |
| 49 | L | A | 2.5355 | |
| 50 | V | A | 1.4461 | |
| 51 | P | A | 0.3234 | |
| 52 | K | A | -0.6822 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1636 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4161 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2815 | |
| 70 | K | A | -1.8011 | |
| 71 | F | A | -0.6519 | |
| 72 | A | A | -0.5771 | |
| 73 | L | A | -0.8546 | |
| 74 | P | A | -1.2606 | |
| 75 | Q | A | -2.4961 | |
| 76 | K | A | -3.0996 | |
| 77 | D | A | -2.9821 | |
| 78 | F | A | -1.6610 | |
| 79 | Y | A | -1.8798 | |
| 80 | D | A | -2.6751 | |
| 81 | P | A | -2.3004 | |
| 82 | E | A | -3.0406 | |
| 83 | K | A | -3.3883 | |
| 84 | E | A | -2.4520 | |
| 85 | R | A | -1.2887 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6354 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9705 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3603 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6968 | |
| 99 | G | A | -0.5399 | |
| 100 | P | A | -0.4139 | |
| 101 | L | A | 0.0246 | |
| 102 | G | A | -0.2425 | |
| 103 | K | A | -0.6835 | |
| 104 | G | A | -0.4996 | |
| 105 | S | A | -0.5279 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1145 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.3762 | |
| 110 | L | A | 0.2976 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1375 | |
| 113 | K | A | -0.5108 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.4156 | |
| 117 | T | A | -0.8149 | |
| 118 | E | A | -1.8139 | |
| 119 | N | A | -2.2306 | |
| 120 | P | A | -1.8582 | |
| 121 | T | A | -1.5335 | |
| 122 | E | A | -2.1661 | |
| 123 | P | A | -0.9507 | |
| 124 | V | A | -0.6944 | |
| 125 | H | A | -1.1774 | |
| 126 | E | A | -1.8979 | |
| 127 | T | A | -1.5827 | |
| 128 | A | A | -1.2949 | |
| 129 | D | A | -2.2538 | |
| 130 | D | A | -1.8224 | |
| 131 | R | A | -1.0161 | |
| 132 | V | A | 0.2382 | |
| 133 | A | A | 0.4208 | |
| 134 | F | A | 0.2680 | |
| 135 | S | A | -0.0971 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.4967 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.1833 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5547 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1873 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.2089 | |
| 157 | D | A | 0.5517 | |
| 158 | L | A | 1.1841 | |
| 159 | A | A | 0.9440 | |
| 160 | P | A | 0.0814 | |
| 161 | P | A | 0.4337 | |
| 162 | C | A | 0.5069 | |
| 163 | P | A | 0.0047 | |
| 164 | G | A | -0.0952 | |
| 165 | L | A | 0.5632 | |
| 166 | P | A | -0.1231 | |
| 167 | P | A | -0.3441 | |
| 168 | G | A | -0.4310 | |
| 169 | A | A | 0.3016 | |
| 170 | C | A | 1.0036 | |
| 171 | P | A | 0.7390 | |
| 172 | P | A | 1.1649 | |
| 173 | I | A | 2.2671 | |
| 174 | Q | A | 1.2324 | |
| 175 | L | A | 1.5722 | |
| 176 | V | A | 0.8948 | |
| 177 | N | A | -0.2758 | |
| 178 | S | A | -0.0887 | |
| 179 | V | A | 0.4319 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3826 | |
| 182 | D | A | 0.0772 | |
| 183 | G | A | -0.1738 | |
| 184 | D | A | -0.5307 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0824 | |
| 190 | F | A | 0.0401 | |
| 191 | G | A | -0.1081 | |
| 192 | N | A | -0.2550 | |
| 193 | M | A | -0.0923 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3830 | |
| 197 | E | A | -2.5827 | |
| 198 | L | A | -1.2295 | |
| 199 | Q | A | -2.5555 | |
| 200 | Q | A | -3.3152 | |
| 201 | D | A | -3.5801 | |
| 202 | R | A | -3.3354 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1651 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3596 | |
| 211 | S | A | -1.8919 | |
| 212 | T | A | -1.4277 | |
| 213 | R | A | -2.0565 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1554 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3457 | |
| 220 | L | A | 0.6141 | |
| 221 | K | A | -1.0943 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8127 | |
| 224 | N | A | -1.4855 | |
| 225 | E | A | -1.2246 | |
| 226 | A | A | -0.5989 | |
| 227 | Y | A | -0.3684 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6547 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0765 | |
| 234 | F | A | 0.2700 | |
| 235 | G | A | -0.8163 | |
| 236 | R | A | -2.5521 | |
| 237 | R | A | -2.7613 | |
| 238 | E | A | -1.9234 | |
| 239 | Q | A | -0.0668 | |
| 240 | V | A | 1.5248 | |
| 241 | Y | A | 1.2082 | |
| 242 | A | A | 0.3587 | |
| 243 | R | A | -0.6448 | |
| 244 | H | A | -0.8110 | |
| 245 | F | A | 0.1009 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.6332 | |
| 249 | S | A | -1.2830 | |
| 250 | G | A | -1.0325 | |
| 251 | P | A | -0.6299 | |
| 252 | D | A | -0.2696 | |
| 253 | G | A | 0.1079 | |
| 254 | V | A | 1.4104 | |
| 255 | P | A | 0.6080 | |
| 256 | L | A | 0.7121 | |
| 257 | P | A | -0.1445 | |
| 258 | S | A | -1.0314 | |
| 259 | D | A | -2.1177 | |
| 260 | G | A | -1.2284 | |
| 261 | P | A | -0.4685 | |
| 262 | P | A | -0.2434 | |
| 263 | S | A | 0.1161 | |
| 264 | P | A | 0.4894 | |
| 265 | L | A | 1.8769 | |
| 266 | Y | A | 1.7515 | |
| 267 | V | A | 1.9282 | |
| 268 | P | A | 1.1067 | |
| 269 | P | A | 0.4313 | |
| 270 | P | A | -0.6561 | |
| 271 | P | A | -0.9092 | |
| 272 | D | A | -1.7097 | |
| 273 | S | A | -0.5670 | |
| 274 | P | A | -0.0580 | |
| 275 | Y | A | 1.2955 | |
| 276 | A | A | 0.8770 | |
| 277 | V | A | 1.8976 | |
| 278 | L | A | 1.7180 | |
| 279 | P | A | 0.4765 | |
| 280 | S | A | 0.0000 | |
| 281 | Y | A | 0.4896 | |
| 282 | D | A | -0.0901 | |
| 283 | Y | A | 1.0918 | |
| 284 | F | A | 0.8097 | |
| 285 | G | A | 0.3129 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8728 | |
| 291 | L | A | 1.6294 | |
| 292 | V | A | 0.6277 | |
| 293 | S | A | -0.1622 | |
| 294 | S | A | -0.9632 | |
| 295 | D | A | -1.8427 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1079 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6363 | |
| 301 | R | A | -1.8543 | |
| 302 | P | A | -0.9533 | |
| 303 | F | A | -0.1946 | |
| 304 | W | A | -0.5673 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0829 | |
| 307 | R | A | -2.8355 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2803 | |
| 310 | G | A | -1.2305 | |
| 311 | N | A | -1.2655 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8104 | |
| 319 | N | A | -0.9378 | |
| 320 | E | A | -1.0388 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3557 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0895 | |
| 333 | N | A | 0.5862 | |
| 334 | F | A | 1.8262 | |
| 335 | T | A | 0.9048 | |
| 336 | I | A | 0.4695 | |
| 337 | S | A | -0.7999 | |
| 338 | Q | A | -1.4559 | |
| 339 | Q | A | -1.1257 | |
| 340 | L | A | 0.6115 | |
| 341 | C | A | -0.0493 | |
| 342 | T | A | -0.4576 | |
| 343 | P | A | -1.1703 | |
| 344 | E | A | -1.7420 | |
| 345 | T | A | -0.8828 | |
| 346 | N | A | -0.6916 | |
| 347 | V | A | 1.2887 | |
| 348 | Y | A | 1.2477 | |
| 349 | D | A | 0.0151 | |
| 350 | P | A | -0.2965 | |
| 351 | S | A | -0.2347 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.4714 | |
| 354 | K | A | -1.6342 | |
| 355 | N | A | -1.6870 | |
| 356 | Y | A | -0.0840 | |
| 357 | L | A | 0.6659 | |
| 358 | R | A | 1.0175 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4002 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0827 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0519 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6880 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3053 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3138 | |
| 376 | L | A | -1.7098 | |
| 377 | D | A | -1.9969 | |
| 378 | P | A | -1.0408 | |
| 379 | G | A | -1.0137 | |
| 380 | V | A | -0.9318 | |
| 381 | L | A | -0.5310 | |
| 382 | A | A | -0.6537 | |
| 383 | H | A | -0.8023 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3964 | |
| 386 | T | A | -0.5417 | |
| 387 | M | A | -0.2919 | |
| 388 | N | A | -0.8572 | |
| 389 | P | A | -1.2347 | |
| 390 | T | A | -1.4348 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4453 | |
| 393 | E | A | -2.7859 | |
| 394 | N | A | -2.3856 | |
| 395 | W | A | -1.4010 | |
| 396 | N | A | -1.1978 | |
| 397 | L | A | -0.2266 | |
| 398 | G | A | 0.4971 | |
| 399 | F | A | 2.3991 | |
| 400 | V | A | 1.8057 | |
| 401 | P | A | 0.0355 | |
| 402 | P | A | -1.8467 | |
| 403 | K | A | -3.3035 | |
| 404 | E | A | -3.7520 | |
| 405 | R | A | -3.8599 | |
| 406 | E | A | -3.7718 | |
| 407 | D | A | -2.8766 | |
| 408 | P | A | -1.7659 | |
| 409 | Y | A | -0.9911 | |
| 410 | K | A | -2.1212 | |
| 411 | G | A | -0.6397 | |
| 412 | L | A | 0.6763 | |
| 413 | I | A | 1.5870 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4006 | |
| 416 | E | A | -1.7017 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9645 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0796 | |
| 421 | E | A | -2.8116 | |
| 422 | R | A | -2.6892 | |
| 423 | F | A | -1.3049 | |
| 424 | S | A | -1.4689 | |
| 425 | Q | A | -1.8570 | |
| 426 | D | A | -2.8849 | |
| 427 | L | A | -1.9717 | |
| 428 | D | A | -2.7707 | |
| 429 | Q | A | -2.6146 | |
| 430 | F | A | -1.4131 | |
| 431 | A | A | -0.8827 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5461 | |
| 435 | K | A | -0.6887 | |
| 436 | F | A | 0.1647 | |
| 437 | L | A | 1.0415 | |
| 438 | Y | A | 0.8374 | |
| 439 | Q | A | -0.2675 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine