| Chain sequence(s) |
H: IVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRWTFGQGTKLEI
G: VQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYTGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARGLLQGVVILDSYYYTMDVWGQGTTVTVS input PDB |
| Selected Chain(s) | G,H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:46)
[INFO] Main: Simulation completed successfully. (00:02:48)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 2 | V | G | 1.0489 | |
| 3 | Q | G | -0.3746 | |
| 4 | L | G | 0.0000 | |
| 5 | V | G | 0.2630 | |
| 6 | Q | G | 0.0000 | |
| 7 | S | G | -0.7041 | |
| 8 | G | G | -0.7622 | |
| 9 | A | G | -0.7559 | |
| 11 | E | G | -1.1898 | |
| 12 | V | G | 0.1971 | |
| 13 | K | G | -1.3579 | |
| 14 | K | G | -2.2031 | |
| 15 | P | G | -2.2867 | |
| 16 | G | G | -1.8399 | |
| 17 | A | G | -1.5329 | |
| 18 | S | G | -1.9711 | |
| 19 | V | G | -1.7331 | |
| 20 | K | G | -2.2904 | |
| 21 | V | G | 0.0000 | |
| 22 | S | G | 0.0000 | |
| 23 | C | G | 0.0000 | |
| 24 | K | G | -0.8364 | |
| 25 | A | G | -0.3172 | |
| 26 | S | G | -0.1742 | |
| 27 | G | G | 0.0468 | |
| 28 | Y | G | 0.2537 | |
| 29 | T | G | 0.1143 | |
| 30 | F | G | 0.0000 | |
| 35 | T | G | 0.4046 | |
| 36 | S | G | 0.4550 | |
| 37 | Y | G | 0.4071 | |
| 38 | G | G | 0.0000 | |
| 39 | I | G | 0.0000 | |
| 40 | S | G | 0.0000 | |
| 41 | W | G | 0.0000 | |
| 42 | V | G | 0.0000 | |
| 43 | R | G | -0.6233 | |
| 44 | Q | G | -0.8182 | |
| 45 | A | G | -1.0739 | |
| 46 | P | G | -0.8093 | |
| 47 | G | G | -1.2140 | |
| 48 | Q | G | -1.9405 | |
| 49 | G | G | -1.5344 | |
| 50 | L | G | 0.0000 | |
| 51 | E | G | -1.5449 | |
| 52 | W | G | 0.0000 | |
| 53 | M | G | 0.0000 | |
| 54 | G | G | 0.0000 | |
| 55 | W | G | 0.0000 | |
| 56 | I | G | 0.0000 | |
| 57 | S | G | 0.0000 | |
| 58 | A | G | 0.0000 | |
| 59 | Y | G | 0.8303 | |
| 62 | T | G | -0.1656 | |
| 63 | G | G | -0.8366 | |
| 64 | N | G | -1.3904 | |
| 65 | T | G | -0.9626 | |
| 66 | N | G | -0.9582 | |
| 67 | Y | G | -0.9759 | |
| 68 | A | G | -1.6087 | |
| 69 | Q | G | -2.3704 | |
| 70 | K | G | -2.5816 | |
| 71 | L | G | -1.7084 | |
| 72 | Q | G | -2.2960 | |
| 74 | G | G | -1.8066 | |
| 75 | R | G | -2.0323 | |
| 76 | V | G | 0.0000 | |
| 77 | T | G | -1.2528 | |
| 78 | M | G | 0.0000 | |
| 79 | T | G | -0.5732 | |
| 80 | T | G | -0.2383 | |
| 81 | D | G | -0.8448 | |
| 82 | T | G | -0.3251 | |
| 83 | S | G | -0.4758 | |
| 84 | T | G | -0.5469 | |
| 85 | S | G | -0.6544 | |
| 86 | T | G | 0.0000 | |
| 87 | A | G | 0.0000 | |
| 88 | Y | G | -0.6592 | |
| 89 | M | G | 0.0000 | |
| 90 | E | G | -2.4373 | |
| 91 | L | G | 0.0000 | |
| 92 | R | G | -3.0224 | |
| 93 | S | G | -2.0237 | |
| 94 | L | G | 0.0000 | |
| 95 | R | G | -3.3531 | |
| 96 | S | G | -2.5593 | |
| 97 | D | G | -2.6316 | |
| 98 | D | G | -1.8762 | |
| 99 | T | G | -1.0002 | |
| 100 | A | G | 0.0000 | |
| 101 | V | G | -0.0781 | |
| 102 | Y | G | 0.0000 | |
| 103 | Y | G | 0.0000 | |
| 104 | C | G | 0.0000 | |
| 105 | A | G | 0.0000 | |
| 106 | R | G | 0.0904 | |
| 107 | G | G | 0.0000 | |
| 108 | L | G | 0.3431 | |
| 109 | L | G | 0.9546 | |
| 110 | Q | G | 0.8079 | |
| 111 | G | G | 0.9182 | |
| 111A | V | G | 2.6157 | |
| 111B | V | G | 2.9153 | |
| 111C | I | G | 2.1315 | |
| 112D | L | G | 1.8741 | |
| 112C | D | G | 0.0691 | |
| 112B | S | G | 0.1501 | |
| 112A | Y | G | 0.4035 | |
| 112 | Y | G | 0.7083 | |
| 113 | Y | G | 0.4926 | |
| 114 | T | G | 0.0000 | |
| 115 | M | G | 0.0000 | |
| 116 | D | G | -0.1738 | |
| 117 | V | G | -0.0838 | |
| 118 | W | G | -0.3660 | |
| 119 | G | G | 0.0000 | |
| 120 | Q | G | -1.2692 | |
| 121 | G | G | 0.0000 | |
| 122 | T | G | 0.0000 | |
| 123 | T | G | -0.3045 | |
| 124 | V | G | 0.0000 | |
| 125 | T | G | -0.4565 | |
| 126 | V | G | 0.0000 | |
| 127 | S | G | -1.1683 | |
| 2 | I | H | 2.5318 | |
| 3 | V | H | 2.1410 | |
| 4 | L | H | 0.0000 | |
| 5 | T | H | -0.5997 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.8977 | |
| 8 | P | H | -0.6049 | |
| 9 | G | H | -0.3171 | |
| 10 | T | H | 0.0000 | |
| 11 | L | H | 0.1561 | |
| 12 | S | H | -0.1946 | |
| 13 | L | H | -0.2998 | |
| 14 | S | H | -0.7161 | |
| 15 | P | H | -1.5052 | |
| 16 | G | H | -2.3361 | |
| 17 | E | H | -2.9442 | |
| 18 | R | H | -2.7714 | |
| 19 | A | H | 0.0000 | |
| 20 | T | H | -0.8185 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -1.0582 | |
| 23 | C | H | 0.0000 | |
| 24 | R | H | -2.4305 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.2403 | |
| 27 | Q | H | -1.0239 | |
| 28 | S | H | -1.2729 | |
| 29 | V | H | -0.4938 | |
| 30 | S | H | -0.2255 | |
| 36 | S | H | -0.2051 | |
| 37 | S | H | 0.1156 | |
| 38 | Y | H | 0.4151 | |
| 39 | L | H | 0.0000 | |
| 40 | A | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | Y | H | 0.0000 | |
| 43 | Q | H | 0.0000 | |
| 44 | Q | H | 0.0000 | |
| 45 | K | H | -1.7648 | |
| 46 | P | H | -1.2395 | |
| 47 | G | H | -1.4045 | |
| 48 | Q | H | -2.0884 | |
| 49 | A | H | -1.5328 | |
| 50 | P | H | 0.0000 | |
| 51 | R | H | -2.0078 | |
| 52 | L | H | 0.0000 | |
| 53 | L | H | 0.0000 | |
| 54 | I | H | 0.0000 | |
| 55 | Y | H | 0.0102 | |
| 56 | G | H | 0.0000 | |
| 57 | A | H | 0.0000 | |
| 65 | S | H | -0.5009 | |
| 66 | S | H | -0.4351 | |
| 67 | R | H | -0.7112 | |
| 68 | A | H | -0.3280 | |
| 69 | T | H | -0.4318 | |
| 70 | G | H | -0.6044 | |
| 71 | I | H | -0.5142 | |
| 72 | P | H | -1.1063 | |
| 74 | D | H | -2.2895 | |
| 75 | R | H | -1.9022 | |
| 76 | F | H | 0.0000 | |
| 77 | S | H | -0.8549 | |
| 78 | G | H | -0.4311 | |
| 79 | S | H | -0.6769 | |
| 80 | G | H | -1.1628 | |
| 83 | S | H | -1.1742 | |
| 84 | G | H | -1.3076 | |
| 85 | T | H | -1.9525 | |
| 86 | D | H | -2.7325 | |
| 87 | F | H | 0.0000 | |
| 88 | T | H | -0.8639 | |
| 89 | L | H | 0.0000 | |
| 90 | T | H | -0.7835 | |
| 91 | I | H | 0.0000 | |
| 92 | S | H | -2.1693 | |
| 93 | R | H | -3.3434 | |
| 94 | L | H | 0.0000 | |
| 95 | E | H | -2.1898 | |
| 96 | P | H | -1.2860 | |
| 97 | E | H | -2.2641 | |
| 98 | D | H | 0.0000 | |
| 99 | F | H | -1.0327 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.0000 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | Q | H | 0.0000 | |
| 106 | Q | H | 0.0000 | |
| 107 | Y | H | 0.0000 | |
| 108 | G | H | -0.0833 | |
| 109 | S | H | -0.4489 | |
| 113 | S | H | -0.6533 | |
| 114 | P | H | -0.8010 | |
| 115 | R | H | -1.1298 | |
| 116 | W | H | 0.0000 | |
| 117 | T | H | 0.2547 | |
| 118 | F | H | 0.0000 | |
| 119 | G | H | -0.7111 | |
| 120 | Q | H | -1.5224 | |
| 121 | G | H | -1.2683 | |
| 122 | T | H | 0.0000 | |
| 123 | K | H | -1.7732 | |
| 124 | L | H | 0.0000 | |
| 125 | E | H | -1.0482 | |
| 126 | I | H | 0.8538 |