Project name: query_structure

Status: done

Started: 2026-03-16 19:54:55
Settings
Chain sequence(s) A: AGECNHGRCPSGLCCSQYGYCGTGPRYCG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:26)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:27)
Show buried residues

Minimal score value
-2.7452
Maximal score value
0.3203
Average score
-0.8049
Total score value
-23.3418

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.2148
2 G A -1.1826
3 E A -2.1419
4 C A -1.9096
5 N A -2.7452
6 H A -2.5130
7 G A -2.0655
8 R A -2.7007
9 C A -1.3952
10 P A -0.6569
11 S A -0.6402
12 G A -0.2923
13 L A 0.3203
14 C A 0.2222
15 C A -0.2671
16 S A 0.0000
17 Q A -0.7164
18 Y A 0.1178
19 G A -0.3230
20 Y A -0.0957
21 C A 0.0000
22 G A 0.0000
23 T A -0.1110
24 G A -0.5013
25 P A -1.0211
26 R A -1.6887
27 Y A -0.0752
28 C A 0.0604
29 G A -0.8051
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Laboratory of Theory of Biopolymers 2018