| Chain sequence(s) |
A: AGECNHGRCPSGLCCSQYGYCGTGPRYCG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:26)
[INFO] Main: Simulation completed successfully. (00:00:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.2148 | |
| 2 | G | A | -1.1826 | |
| 3 | E | A | -2.1419 | |
| 4 | C | A | -1.9096 | |
| 5 | N | A | -2.7452 | |
| 6 | H | A | -2.5130 | |
| 7 | G | A | -2.0655 | |
| 8 | R | A | -2.7007 | |
| 9 | C | A | -1.3952 | |
| 10 | P | A | -0.6569 | |
| 11 | S | A | -0.6402 | |
| 12 | G | A | -0.2923 | |
| 13 | L | A | 0.3203 | |
| 14 | C | A | 0.2222 | |
| 15 | C | A | -0.2671 | |
| 16 | S | A | 0.0000 | |
| 17 | Q | A | -0.7164 | |
| 18 | Y | A | 0.1178 | |
| 19 | G | A | -0.3230 | |
| 20 | Y | A | -0.0957 | |
| 21 | C | A | 0.0000 | |
| 22 | G | A | 0.0000 | |
| 23 | T | A | -0.1110 | |
| 24 | G | A | -0.5013 | |
| 25 | P | A | -1.0211 | |
| 26 | R | A | -1.6887 | |
| 27 | Y | A | -0.0752 | |
| 28 | C | A | 0.0604 | |
| 29 | G | A | -0.8051 |