| Chain sequence(s) |
A: FKFEKGH
C: FKFEKGH B: FKFEKGH E: FKFEKGH D: FKFEKGH G: FKFEKGH F: FKFEKGH H: FKFEKGH input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:25)
[INFO] Main: Simulation completed successfully. (00:05:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | -1.2455 | |
| 2 | K | A | -2.2668 | |
| 3 | F | A | 0.0000 | |
| 4 | E | A | -1.7711 | |
| 5 | K | A | -1.0616 | |
| 6 | G | A | -1.0884 | |
| 7 | H | A | -1.1443 | |
| 1 | F | B | -1.4439 | |
| 2 | K | B | -2.4019 | |
| 3 | F | B | 0.0000 | |
| 4 | E | B | -1.6630 | |
| 5 | K | B | -0.8153 | |
| 6 | G | B | -0.9460 | |
| 7 | H | B | -1.1519 | |
| 1 | F | C | 0.6804 | |
| 2 | K | C | -1.5495 | |
| 3 | F | C | -1.4991 | |
| 4 | E | C | -3.0231 | |
| 5 | K | C | -2.5452 | |
| 6 | G | C | -1.9275 | |
| 7 | H | C | -1.5750 | |
| 1 | F | D | 0.2254 | |
| 2 | K | D | -1.7971 | |
| 3 | F | D | -1.5114 | |
| 4 | E | D | -2.7381 | |
| 5 | K | D | -1.8927 | |
| 6 | G | D | -1.6793 | |
| 7 | H | D | -1.5651 | |
| 1 | F | E | -1.3282 | |
| 2 | K | E | -2.3326 | |
| 3 | F | E | 0.0000 | |
| 4 | E | E | -1.7804 | |
| 5 | K | E | -0.9265 | |
| 6 | G | E | -1.0750 | |
| 7 | H | E | -1.2347 | |
| 1 | F | F | -1.2031 | |
| 2 | K | F | -2.2644 | |
| 3 | F | F | 0.0000 | |
| 4 | E | F | -1.9934 | |
| 5 | K | F | -1.2212 | |
| 6 | G | F | -1.3302 | |
| 7 | H | F | -1.2800 | |
| 1 | F | G | -0.2175 | |
| 2 | K | G | -2.0250 | |
| 3 | F | G | -1.5735 | |
| 4 | E | G | -2.6817 | |
| 5 | K | G | -1.7765 | |
| 6 | G | G | -1.6020 | |
| 7 | H | G | -1.4957 | |
| 1 | F | H | -0.0569 | |
| 2 | K | H | -1.8502 | |
| 3 | F | H | -1.4838 | |
| 4 | E | H | -2.7979 | |
| 5 | K | H | -2.1660 | |
| 6 | G | H | -1.8004 | |
| 7 | H | H | -1.5809 |