Project name: sol_493_1st

Status: done

Started: 2024-06-18 22:20:19
Settings
Chain sequence(s) A: KFTLPEDFGKRESDLKLSVKLVEMLKNINLRLGCRLSRKKIEEVKANPKYIDLTLEAIFNEAPKLAKELAEELRLKNIESLALLLCGVSPPGNLALEFTARVNGNLELTYVMVFEAWKYFNKNGPKLLKEYSKGIYEGDLSDKVPYKGIEISLKLVEEPINKGIELRETDPSLLPELMKKLEEKIKELKKEVEELSRENVGEYIEYSRDPRIEEAARRFPKKLYEIGEKIAKEKGLSEKDIKAIALLVASRNVQLCSTILNVAFPLEVIGRIFFFPLILMEKSLEFFEEVVKELKEEEKKKL
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:06:21)
[INFO]       Main:     Simulation completed successfully.                                          (00:06:23)
Show buried residues

Minimal score value
-5.8669
Maximal score value
1.6086
Average score
-1.3404
Total score value
-404.8114

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -1.5030
2 F A -0.3897
3 T A -0.5443
4 L A -0.4667
5 P A -1.1313
6 E A -2.8549
7 D A -3.4351
8 F A -2.0580
9 G A -1.8720
10 K A -2.9349
11 R A -2.7155
12 E A -2.4941
13 S A -1.5057
14 D A -1.2258
15 L A 0.1287
16 K A -0.7187
17 L A -0.6751
18 S A 0.7750
19 V A 1.6086
20 K A 0.1225
21 L A 0.5832
22 V A 0.9671
23 E A -0.2361
24 M A -0.7102
25 L A 0.1982
26 K A -0.9484
27 N A 0.0000
28 I A -0.4126
29 N A 0.0000
30 L A -0.7898
31 R A -1.0785
32 L A 0.0000
33 G A 0.0000
34 C A 0.0000
35 R A -1.0005
36 L A 0.0000
37 S A -2.6687
38 R A -3.4456
39 K A -3.8005
40 K A -3.8971
41 I A 0.0000
42 E A -4.5460
43 E A -4.3242
44 V A 0.0000
45 K A -3.4935
46 A A -2.4534
47 N A -2.3840
48 P A -1.9300
49 K A -2.6459
50 Y A -1.5646
51 I A -1.8468
52 D A -2.6522
53 L A -1.7131
54 T A 0.0000
55 L A -1.3669
56 E A -2.3657
57 A A 0.0000
58 I A 0.0000
59 F A 0.0000
60 N A -1.4686
61 E A -1.5035
62 A A 0.0000
63 P A 0.0000
64 K A -1.9839
65 L A 0.0000
66 A A 0.0000
67 K A -2.2776
68 E A -3.5636
69 L A 0.0000
70 A A 0.0000
71 E A -4.3304
72 E A -3.7635
73 L A -2.8430
74 R A -3.7608
75 L A -2.6626
76 K A -2.7995
77 N A -2.1910
78 I A -0.3839
79 E A 0.0000
80 S A 0.0000
81 L A 0.0000
82 A A 0.0000
83 L A 0.0000
84 L A 0.0000
85 L A 0.0000
86 C A 0.0000
87 G A 0.0000
88 V A 0.0000
89 S A 0.0000
90 P A 0.0000
91 P A 0.0000
92 G A 0.0000
93 N A -0.1261
94 L A 0.0571
95 A A 0.0000
96 L A 0.0000
97 E A -0.5247
98 F A 0.0000
99 T A 0.0000
100 A A 0.0000
101 R A -1.7193
102 V A 0.0000
103 N A -2.1985
104 G A -1.8278
105 N A -1.3315
106 L A 0.0000
107 E A 0.0000
108 L A 0.0000
109 T A 0.0000
110 Y A 0.0000
111 V A 0.0000
112 M A 0.0000
113 V A 0.0000
114 F A -0.5996
115 E A -1.6015
116 A A 0.0000
117 W A 0.0000
118 K A -2.4401
119 Y A -1.2678
120 F A 0.0000
121 N A -1.8674
122 K A -2.3747
123 N A 0.0000
124 G A 0.0000
125 P A -2.4179
126 K A -2.8676
127 L A 0.0000
128 L A 0.0000
129 K A -3.4107
130 E A -2.8935
131 Y A -1.8963
132 S A 0.0000
133 K A -2.9570
134 G A -1.7491
135 I A -1.3420
136 Y A -1.6281
137 E A -2.6249
138 G A -2.1574
139 D A -3.0031
140 L A 0.0000
141 S A -2.4342
142 D A -2.3766
143 K A -1.1592
144 V A 0.0000
145 P A -0.6777
146 Y A -0.8645
147 K A -1.5683
148 G A -0.9095
149 I A 0.0000
150 E A -1.6182
151 I A 0.0218
152 S A -0.4013
153 L A -1.1742
154 K A -1.7344
155 L A -0.8932
156 V A 0.0000
157 E A -1.9909
158 E A -2.8983
159 P A -2.0723
160 I A 0.0000
161 N A -2.2931
162 K A -2.9666
163 G A 0.0000
164 I A 0.0000
165 E A -3.5664
166 L A -2.3339
167 R A -3.0660
168 E A -3.5017
169 T A -2.1591
170 D A -2.0135
171 P A -1.5389
172 S A -0.5250
173 L A 0.0291
174 L A -0.8444
175 P A -1.0875
176 E A -1.9420
177 L A -1.6256
178 M A -2.2241
179 K A -3.9233
180 K A -4.2281
181 L A 0.0000
182 E A -4.3031
183 E A -5.0191
184 K A -4.2624
185 I A 0.0000
186 K A -4.8693
187 E A -4.6921
188 L A 0.0000
189 K A -4.1531
190 K A -4.7960
191 E A -4.2395
192 V A 0.0000
193 E A -4.5712
194 E A -4.7589
195 L A 0.0000
196 S A -3.2489
197 R A -4.1197
198 E A -3.7106
199 N A 0.0000
200 V A -1.5063
201 G A -2.7182
202 E A -2.5362
203 Y A -0.9716
204 I A -0.8932
205 E A -1.8175
206 Y A -0.0289
207 S A 0.0000
208 R A -0.9648
209 D A -1.0205
210 P A -0.9865
211 R A -1.8425
212 I A 0.0000
213 E A -1.6771
214 E A -1.6033
215 A A 0.0000
216 A A 0.0000
217 R A -2.7723
218 R A -1.9334
219 F A 0.0000
220 P A 0.0000
221 K A -2.3244
222 K A -2.1505
223 L A 0.0000
224 Y A -1.5804
225 E A -2.6922
226 I A -1.7264
227 G A 0.0000
228 E A -2.4739
229 K A -3.2953
230 I A -2.2278
231 A A 0.0000
232 K A -3.8443
233 E A -3.8471
234 K A -3.5227
235 G A -2.4546
236 L A -1.8797
237 S A -1.7940
238 E A -2.8345
239 K A -2.3716
240 D A 0.0000
241 I A -1.9956
242 K A -1.4533
243 A A 0.0000
244 I A 0.0000
245 A A 0.0000
246 L A 0.0000
247 L A 0.0000
248 V A 0.0000
249 A A 0.0000
250 S A 0.0000
251 R A 0.0000
252 N A 0.0000
253 V A 0.0000
254 Q A -1.1449
255 L A 0.0000
256 C A 0.0000
257 S A -0.4122
258 T A -0.4355
259 I A 0.0000
260 L A 0.0000
261 N A -0.3635
262 V A 0.5968
263 A A -0.2484
264 F A 0.0000
265 P A -0.0397
266 L A -0.0223
267 E A -0.7979
268 V A 0.9719
269 I A 0.0000
270 G A -0.1678
271 R A -0.1128
272 I A 0.0000
273 F A 0.1724
274 F A 0.0000
275 F A 0.0000
276 P A 0.0000
277 L A 0.3984
278 I A 0.0000
279 L A 0.0000
280 M A -0.2908
281 E A -0.8911
282 K A -1.6597
283 S A 0.0000
284 L A -1.0205
285 E A -2.4137
286 F A 0.0000
287 F A 0.0000
288 E A -2.6867
289 E A -3.5590
290 V A 0.0000
291 V A 0.0000
292 K A -4.4151
293 E A -4.6832
294 L A -4.1803
295 K A -5.0876
296 E A -5.8669
297 E A -5.7511
298 E A -5.1528
299 K A -4.7516
300 K A -4.5475
301 K A -3.5377
302 L A -0.9478
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Laboratory of Theory of Biopolymers 2018