| Chain sequence(s) |
A: MSHHHHHHSGAKNIFHWFFEESSKLSDEELEKLLRSFAGDLQNAFLVYLDSDEEGKKHAYLILVDMLEDMMKIIAEATGKDVEEMLKGVEKLKEESEGDPIKLLELFFEEVLKGMEEFPDAKIMELLKKGKPMAGLSYEEQLKWLKEFAERLIKLLKESEKLSEEEKEKLKEEFDKLLGEFMGNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:59)
[INFO] Main: Simulation completed successfully. (00:07:00)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5551 | |
| 2 | S | A | -0.6182 | |
| 3 | H | A | -1.7533 | |
| 4 | H | A | -2.3468 | |
| 5 | H | A | -2.7666 | |
| 6 | H | A | -2.7751 | |
| 7 | H | A | -2.5733 | |
| 8 | H | A | -2.1950 | |
| 9 | S | A | -1.6854 | |
| 10 | G | A | -1.5233 | |
| 11 | A | A | -1.5323 | |
| 12 | K | A | -2.1548 | |
| 13 | N | A | -1.7528 | |
| 14 | I | A | 0.0000 | |
| 15 | F | A | 0.0000 | |
| 16 | H | A | -1.6534 | |
| 17 | W | A | 0.0000 | |
| 18 | F | A | 0.0000 | |
| 19 | F | A | 0.0000 | |
| 20 | E | A | -2.8004 | |
| 21 | E | A | -2.1329 | |
| 22 | S | A | 0.0000 | |
| 23 | S | A | -1.6218 | |
| 24 | K | A | -2.3737 | |
| 25 | L | A | 0.0000 | |
| 26 | S | A | -2.4946 | |
| 27 | D | A | -3.5847 | |
| 28 | E | A | -3.8178 | |
| 29 | E | A | -3.4055 | |
| 30 | L | A | 0.0000 | |
| 31 | E | A | -3.8408 | |
| 32 | K | A | -3.6585 | |
| 33 | L | A | 0.0000 | |
| 34 | L | A | -1.8164 | |
| 35 | R | A | -2.7642 | |
| 36 | S | A | -2.0230 | |
| 37 | F | A | 0.0000 | |
| 38 | A | A | 0.0000 | |
| 39 | G | A | -1.1667 | |
| 40 | D | A | -1.4165 | |
| 41 | L | A | 0.0000 | |
| 42 | Q | A | -1.0138 | |
| 43 | N | A | -0.9089 | |
| 44 | A | A | 0.0000 | |
| 45 | F | A | 0.0000 | |
| 46 | L | A | -0.6313 | |
| 47 | V | A | -1.0574 | |
| 48 | Y | A | 0.0000 | |
| 49 | L | A | 0.0000 | |
| 50 | D | A | -2.7528 | |
| 51 | S | A | -3.1293 | |
| 52 | D | A | -4.2050 | |
| 53 | E | A | -4.2393 | |
| 54 | E | A | -4.2474 | |
| 55 | G | A | 0.0000 | |
| 56 | K | A | -3.3317 | |
| 57 | K | A | -3.0866 | |
| 58 | H | A | -1.6249 | |
| 59 | A | A | 0.0000 | |
| 60 | Y | A | -1.1700 | |
| 61 | L | A | -0.1149 | |
| 62 | I | A | -0.4705 | |
| 63 | L | A | 0.0000 | |
| 64 | V | A | 0.0000 | |
| 65 | D | A | -1.9266 | |
| 66 | M | A | 0.0000 | |
| 67 | L | A | 0.0000 | |
| 68 | E | A | -2.0183 | |
| 69 | D | A | -1.9923 | |
| 70 | M | A | 0.0000 | |
| 71 | M | A | 0.0000 | |
| 72 | K | A | -1.9954 | |
| 73 | I | A | -1.4309 | |
| 74 | I | A | 0.0000 | |
| 75 | A | A | 0.0000 | |
| 76 | E | A | -2.5016 | |
| 77 | A | A | -1.7025 | |
| 78 | T | A | 0.0000 | |
| 79 | G | A | -1.9735 | |
| 80 | K | A | -2.7995 | |
| 81 | D | A | -3.4754 | |
| 82 | V | A | -2.7563 | |
| 83 | E | A | -3.5030 | |
| 84 | E | A | -3.8221 | |
| 85 | M | A | 0.0000 | |
| 86 | L | A | -2.7737 | |
| 87 | K | A | -3.4489 | |
| 88 | G | A | -2.6677 | |
| 89 | V | A | 0.0000 | |
| 90 | E | A | -3.7953 | |
| 91 | K | A | -3.5671 | |
| 92 | L | A | 0.0000 | |
| 93 | K | A | -3.7005 | |
| 94 | E | A | -4.3765 | |
| 95 | E | A | -4.1841 | |
| 96 | S | A | 0.0000 | |
| 97 | E | A | -3.5678 | |
| 98 | G | A | -2.5965 | |
| 99 | D | A | -2.5171 | |
| 100 | P | A | 0.0000 | |
| 101 | I | A | 0.0000 | |
| 102 | K | A | -2.4654 | |
| 103 | L | A | 0.0000 | |
| 104 | L | A | 0.0000 | |
| 105 | E | A | -2.6009 | |
| 106 | L | A | -1.6492 | |
| 107 | F | A | 0.0000 | |
| 108 | F | A | 0.0000 | |
| 109 | E | A | -2.1851 | |
| 110 | E | A | -1.8758 | |
| 111 | V | A | -1.2521 | |
| 112 | L | A | -2.0363 | |
| 113 | K | A | -2.9714 | |
| 114 | G | A | 0.0000 | |
| 115 | M | A | 0.0000 | |
| 116 | E | A | -3.4495 | |
| 117 | E | A | -3.3067 | |
| 118 | F | A | -2.5045 | |
| 119 | P | A | -2.4450 | |
| 120 | D | A | -2.8035 | |
| 121 | A | A | 0.0000 | |
| 122 | K | A | -2.2380 | |
| 123 | I | A | 0.0000 | |
| 124 | M | A | 0.0000 | |
| 125 | E | A | -2.7822 | |
| 126 | L | A | -2.1191 | |
| 127 | L | A | -1.6441 | |
| 128 | K | A | -2.4404 | |
| 129 | K | A | -2.8545 | |
| 130 | G | A | -2.3769 | |
| 131 | K | A | -2.7687 | |
| 132 | P | A | -1.6029 | |
| 133 | M | A | 0.0000 | |
| 134 | A | A | -1.8879 | |
| 135 | G | A | -1.4177 | |
| 136 | L | A | -1.5732 | |
| 137 | S | A | -1.5425 | |
| 138 | Y | A | -2.1725 | |
| 139 | E | A | -3.0881 | |
| 140 | E | A | -3.0258 | |
| 141 | Q | A | 0.0000 | |
| 142 | L | A | 0.0000 | |
| 143 | K | A | -3.3310 | |
| 144 | W | A | -2.3223 | |
| 145 | L | A | 0.0000 | |
| 146 | K | A | -3.1262 | |
| 147 | E | A | -3.5776 | |
| 148 | F | A | 0.0000 | |
| 149 | A | A | 0.0000 | |
| 150 | E | A | -4.0235 | |
| 151 | R | A | -3.7396 | |
| 152 | L | A | 0.0000 | |
| 153 | I | A | 0.0000 | |
| 154 | K | A | -3.5932 | |
| 155 | L | A | 0.0000 | |
| 156 | L | A | 0.0000 | |
| 157 | K | A | -3.4682 | |
| 158 | E | A | -3.8873 | |
| 159 | S | A | 0.0000 | |
| 160 | E | A | -3.7269 | |
| 161 | K | A | -3.5217 | |
| 162 | L | A | -3.2471 | |
| 163 | S | A | -2.8013 | |
| 164 | E | A | -4.3359 | |
| 165 | E | A | -4.3431 | |
| 166 | E | A | -4.3773 | |
| 167 | K | A | -4.9498 | |
| 168 | E | A | -5.2094 | |
| 169 | K | A | -4.9452 | |
| 170 | L | A | 0.0000 | |
| 171 | K | A | -3.7532 | |
| 172 | E | A | -4.5128 | |
| 173 | E | A | -3.9266 | |
| 174 | F | A | 0.0000 | |
| 175 | D | A | -3.2866 | |
| 176 | K | A | -3.5456 | |
| 177 | L | A | 0.0000 | |
| 178 | L | A | 0.0000 | |
| 179 | G | A | -2.1050 | |
| 180 | E | A | -2.1626 | |
| 181 | F | A | -0.9795 | |
| 182 | M | A | -1.2471 | |
| 183 | G | A | -1.9867 | |
| 184 | N | A | -2.1445 | |
| 185 | S | A | -1.8611 |