| Chain sequence(s) |
A: MSHHHHHHSGSPEEELERLLKEIREQREEILEKIKKLSEGEEVDPEEIWDKLWEFFKKIDRALMIRVMTSDDIEAERERMRELHRAWSEAMHAFLNLRFADEPNPEYYERIKEALERALRAVDPSLVNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:46)
[INFO] Main: Simulation completed successfully. (00:05:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5510 | |
| 2 | S | A | -0.6434 | |
| 3 | H | A | -1.7367 | |
| 4 | H | A | -2.3619 | |
| 5 | H | A | -2.7348 | |
| 6 | H | A | -2.7698 | |
| 7 | H | A | -2.5355 | |
| 8 | H | A | -2.3800 | |
| 9 | S | A | -1.4104 | |
| 10 | G | A | -1.5780 | |
| 11 | S | A | -1.5816 | |
| 12 | P | A | -1.8455 | |
| 13 | E | A | -3.0435 | |
| 14 | E | A | -2.9687 | |
| 15 | E | A | -2.5640 | |
| 16 | L | A | -2.5347 | |
| 17 | E | A | -3.3852 | |
| 18 | R | A | -3.2614 | |
| 19 | L | A | 0.0000 | |
| 20 | L | A | -2.5014 | |
| 21 | K | A | -3.6196 | |
| 22 | E | A | -3.5920 | |
| 23 | I | A | 0.0000 | |
| 24 | R | A | -3.2764 | |
| 25 | E | A | -4.1647 | |
| 26 | Q | A | -3.6140 | |
| 27 | R | A | -3.1869 | |
| 28 | E | A | -4.1732 | |
| 29 | E | A | -4.2097 | |
| 30 | I | A | 0.0000 | |
| 31 | L | A | -2.8212 | |
| 32 | E | A | -3.5810 | |
| 33 | K | A | -3.6054 | |
| 34 | I | A | 0.0000 | |
| 35 | K | A | -3.1893 | |
| 36 | K | A | -3.3629 | |
| 37 | L | A | -3.0227 | |
| 38 | S | A | 0.0000 | |
| 39 | E | A | -3.6371 | |
| 40 | G | A | -3.3009 | |
| 41 | E | A | -4.0133 | |
| 42 | E | A | -3.4973 | |
| 43 | V | A | -3.0689 | |
| 44 | D | A | -3.5502 | |
| 45 | P | A | -2.7220 | |
| 46 | E | A | -3.7431 | |
| 47 | E | A | -3.8105 | |
| 48 | I | A | 0.0000 | |
| 49 | W | A | -2.1350 | |
| 50 | D | A | -3.0112 | |
| 51 | K | A | -2.6597 | |
| 52 | L | A | 0.0000 | |
| 53 | W | A | -1.2866 | |
| 54 | E | A | -2.4743 | |
| 55 | F | A | 0.0000 | |
| 56 | F | A | 0.0000 | |
| 57 | K | A | -2.5502 | |
| 58 | K | A | -2.1557 | |
| 59 | I | A | 0.0000 | |
| 60 | D | A | -2.0300 | |
| 61 | R | A | -1.6155 | |
| 62 | A | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | M | A | 0.0485 | |
| 65 | I | A | 0.0000 | |
| 66 | R | A | -0.6300 | |
| 67 | V | A | -0.2710 | |
| 68 | M | A | 0.8223 | |
| 69 | T | A | -0.3376 | |
| 70 | S | A | -1.1818 | |
| 71 | D | A | -2.5104 | |
| 72 | D | A | -2.8669 | |
| 73 | I | A | -1.8204 | |
| 74 | E | A | -3.2170 | |
| 75 | A | A | -2.5812 | |
| 76 | E | A | 0.0000 | |
| 77 | R | A | -3.7111 | |
| 78 | E | A | -4.0327 | |
| 79 | R | A | -3.5358 | |
| 80 | M | A | -3.0931 | |
| 81 | R | A | -4.0351 | |
| 82 | E | A | -3.4632 | |
| 83 | L | A | 0.0000 | |
| 84 | H | A | -3.0581 | |
| 85 | R | A | -3.1861 | |
| 86 | A | A | 0.0000 | |
| 87 | W | A | -1.6193 | |
| 88 | S | A | -1.4518 | |
| 89 | E | A | -1.8950 | |
| 90 | A | A | 0.0000 | |
| 91 | M | A | 0.0000 | |
| 92 | H | A | -1.3807 | |
| 93 | A | A | 0.0000 | |
| 94 | F | A | 0.0000 | |
| 95 | L | A | -0.0812 | |
| 96 | N | A | -0.9455 | |
| 97 | L | A | 0.0000 | |
| 98 | R | A | -0.9168 | |
| 99 | F | A | 0.5159 | |
| 100 | A | A | -1.0967 | |
| 101 | D | A | -2.4860 | |
| 102 | E | A | -2.9748 | |
| 103 | P | A | -2.7287 | |
| 104 | N | A | -2.5642 | |
| 105 | P | A | -2.4982 | |
| 106 | E | A | -2.8494 | |
| 107 | Y | A | -2.5183 | |
| 108 | Y | A | -2.8546 | |
| 109 | E | A | -3.7156 | |
| 110 | R | A | -3.4305 | |
| 111 | I | A | 0.0000 | |
| 112 | K | A | -3.0577 | |
| 113 | E | A | -3.2979 | |
| 114 | A | A | 0.0000 | |
| 115 | L | A | 0.0000 | |
| 116 | E | A | -2.0430 | |
| 117 | R | A | -2.3625 | |
| 118 | A | A | 0.0000 | |
| 119 | L | A | 0.0000 | |
| 120 | R | A | -2.3845 | |
| 121 | A | A | 0.0000 | |
| 122 | V | A | 0.0000 | |
| 123 | D | A | -1.1889 | |
| 124 | P | A | -1.4673 | |
| 125 | S | A | -1.0711 | |
| 126 | L | A | 0.0000 | |
| 127 | V | A | -1.2352 | |
| 128 | N | A | -1.5660 | |
| 129 | S | A | -0.8021 |