Chain sequence(s) |
Y: KAMHVAQPAVVLASSRGIASFVCEYASPGKATEVRVTVLRQADSQVTEVCAATYMMGNELTFLDDSICTGTSSGNQVNLTIQGLRAMDTGLYICKVELMYPPPYYLGIGNGTQIYVIDP
input PDB |
Selected Chain(s) | Y |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with Y chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:46) [INFO] Main: Simulation completed successfully. (00:00:47) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | K | Y | -1.8503 | |
2 | A | Y | -0.8386 | |
3 | M | Y | 0.0000 | |
4 | H | Y | -1.1369 | |
5 | V | Y | 0.0000 | |
6 | A | Y | -0.7610 | |
7 | Q | Y | 0.0000 | |
8 | P | Y | 0.1581 | |
9 | A | Y | 0.5300 | |
10 | V | Y | 2.0269 | |
11 | V | Y | 1.7506 | |
12 | L | Y | 2.3811 | |
13 | A | Y | 0.0000 | |
14 | S | Y | -0.2292 | |
15 | S | Y | -0.9519 | |
16 | R | Y | -2.2870 | |
17 | G | Y | 0.0000 | |
18 | I | Y | -0.6574 | |
19 | A | Y | 0.0000 | |
20 | S | Y | -0.1788 | |
21 | F | Y | 0.0000 | |
22 | V | Y | -0.5408 | |
23 | C | Y | 0.0000 | |
24 | E | Y | -2.1475 | |
25 | Y | Y | 0.0000 | |
26 | A | Y | -1.1907 | |
27 | S | Y | -1.2340 | |
28 | P | Y | -1.0175 | |
29 | G | Y | -1.4076 | |
30 | K | Y | -1.9510 | |
31 | A | Y | -0.4747 | |
32 | T | Y | -0.0622 | |
33 | E | Y | -0.2764 | |
34 | V | Y | 0.0000 | |
35 | R | Y | -0.6871 | |
36 | V | Y | 0.0000 | |
37 | T | Y | 0.0000 | |
38 | V | Y | 0.0000 | |
39 | L | Y | -0.2153 | |
40 | R | Y | -0.3524 | |
41 | Q | Y | -0.6070 | |
42 | A | Y | -1.0079 | |
43 | D | Y | -2.0088 | |
44 | S | Y | -1.2378 | |
45 | Q | Y | -0.9325 | |
46 | V | Y | 0.4168 | |
47 | T | Y | -0.3201 | |
48 | E | Y | -1.3314 | |
49 | V | Y | -0.2068 | |
50 | C | Y | 0.0000 | |
51 | A | Y | -0.2737 | |
52 | A | Y | 0.0000 | |
53 | T | Y | -0.5904 | |
54 | Y | Y | -0.4916 | |
55 | M | Y | 0.2820 | |
56 | M | Y | 0.5024 | |
57 | G | Y | -0.6706 | |
58 | N | Y | -1.4161 | |
59 | E | Y | -2.1846 | |
60 | L | Y | 0.0000 | |
61 | T | Y | -0.5550 | |
62 | F | Y | 0.0000 | |
63 | L | Y | 0.0795 | |
64 | D | Y | -1.5898 | |
65 | D | Y | -1.9834 | |
66 | S | Y | -0.5816 | |
67 | I | Y | 0.3898 | |
68 | C | Y | 0.0000 | |
69 | T | Y | -0.4277 | |
70 | G | Y | -0.9108 | |
71 | T | Y | -1.2733 | |
72 | S | Y | -1.8289 | |
73 | S | Y | -1.5952 | |
74 | G | Y | -1.7820 | |
75 | N | Y | -1.8475 | |
76 | Q | Y | -2.0520 | |
77 | V | Y | 0.0000 | |
78 | N | Y | -1.4974 | |
79 | L | Y | 0.0000 | |
80 | T | Y | -0.3043 | |
81 | I | Y | 0.0000 | |
82 | Q | Y | -1.1546 | |
83 | G | Y | -1.3517 | |
84 | L | Y | 0.0000 | |
85 | R | Y | -1.7859 | |
86 | A | Y | 0.0341 | |
87 | M | Y | 0.4735 | |
88 | D | Y | -0.2982 | |
89 | T | Y | 0.3530 | |
90 | G | Y | 0.0000 | |
91 | L | Y | 0.3499 | |
92 | Y | Y | 0.0000 | |
93 | I | Y | 0.0000 | |
94 | C | Y | 0.0000 | |
95 | K | Y | 0.3608 | |
96 | V | Y | 0.0000 | |
97 | E | Y | 0.7021 | |
98 | L | Y | 0.0000 | |
99 | M | Y | 1.0950 | |
100 | Y | Y | 0.9933 | |
101 | P | Y | 0.2360 | |
102 | P | Y | 0.1946 | |
103 | P | Y | 0.4543 | |
104 | Y | Y | 1.6666 | |
105 | Y | Y | 1.6103 | |
106 | L | Y | 1.9182 | |
107 | G | Y | 0.0000 | |
108 | I | Y | 1.5075 | |
109 | G | Y | -0.2213 | |
110 | N | Y | -1.0274 | |
111 | G | Y | 0.0000 | |
112 | T | Y | 0.0000 | |
113 | Q | Y | 0.5270 | |
114 | I | Y | 0.0000 | |
115 | Y | Y | 1.6663 | |
116 | V | Y | 0.0000 | |
117 | I | Y | 1.1869 | |
118 | D | Y | -0.7967 | |
119 | P | Y | -0.8200 |