Project name: CTLA4.NB

Status: done

Started: 2025-07-18 12:16:14
Settings
Chain sequence(s) Y: KAMHVAQPAVVLASSRGIASFVCEYASPGKATEVRVTVLRQADSQVTEVCAATYMMGNELTFLDDSICTGTSSGNQVNLTIQGLRAMDTGLYICKVELMYPPPYYLGIGNGTQIYVIDP
input PDB
Selected Chain(s) Y
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with Y chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:46)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:47)
Show buried residues

Minimal score value
-2.287
Maximal score value
2.3811
Average score
-0.2989
Total score value
-35.5657

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K Y -1.8503
2 A Y -0.8386
3 M Y 0.0000
4 H Y -1.1369
5 V Y 0.0000
6 A Y -0.7610
7 Q Y 0.0000
8 P Y 0.1581
9 A Y 0.5300
10 V Y 2.0269
11 V Y 1.7506
12 L Y 2.3811
13 A Y 0.0000
14 S Y -0.2292
15 S Y -0.9519
16 R Y -2.2870
17 G Y 0.0000
18 I Y -0.6574
19 A Y 0.0000
20 S Y -0.1788
21 F Y 0.0000
22 V Y -0.5408
23 C Y 0.0000
24 E Y -2.1475
25 Y Y 0.0000
26 A Y -1.1907
27 S Y -1.2340
28 P Y -1.0175
29 G Y -1.4076
30 K Y -1.9510
31 A Y -0.4747
32 T Y -0.0622
33 E Y -0.2764
34 V Y 0.0000
35 R Y -0.6871
36 V Y 0.0000
37 T Y 0.0000
38 V Y 0.0000
39 L Y -0.2153
40 R Y -0.3524
41 Q Y -0.6070
42 A Y -1.0079
43 D Y -2.0088
44 S Y -1.2378
45 Q Y -0.9325
46 V Y 0.4168
47 T Y -0.3201
48 E Y -1.3314
49 V Y -0.2068
50 C Y 0.0000
51 A Y -0.2737
52 A Y 0.0000
53 T Y -0.5904
54 Y Y -0.4916
55 M Y 0.2820
56 M Y 0.5024
57 G Y -0.6706
58 N Y -1.4161
59 E Y -2.1846
60 L Y 0.0000
61 T Y -0.5550
62 F Y 0.0000
63 L Y 0.0795
64 D Y -1.5898
65 D Y -1.9834
66 S Y -0.5816
67 I Y 0.3898
68 C Y 0.0000
69 T Y -0.4277
70 G Y -0.9108
71 T Y -1.2733
72 S Y -1.8289
73 S Y -1.5952
74 G Y -1.7820
75 N Y -1.8475
76 Q Y -2.0520
77 V Y 0.0000
78 N Y -1.4974
79 L Y 0.0000
80 T Y -0.3043
81 I Y 0.0000
82 Q Y -1.1546
83 G Y -1.3517
84 L Y 0.0000
85 R Y -1.7859
86 A Y 0.0341
87 M Y 0.4735
88 D Y -0.2982
89 T Y 0.3530
90 G Y 0.0000
91 L Y 0.3499
92 Y Y 0.0000
93 I Y 0.0000
94 C Y 0.0000
95 K Y 0.3608
96 V Y 0.0000
97 E Y 0.7021
98 L Y 0.0000
99 M Y 1.0950
100 Y Y 0.9933
101 P Y 0.2360
102 P Y 0.1946
103 P Y 0.4543
104 Y Y 1.6666
105 Y Y 1.6103
106 L Y 1.9182
107 G Y 0.0000
108 I Y 1.5075
109 G Y -0.2213
110 N Y -1.0274
111 G Y 0.0000
112 T Y 0.0000
113 Q Y 0.5270
114 I Y 0.0000
115 Y Y 1.6663
116 V Y 0.0000
117 I Y 1.1869
118 D Y -0.7967
119 P Y -0.8200
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Laboratory of Theory of Biopolymers 2018