| Chain sequence(s) |
A: MAAAAAAGAGPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRSRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLEICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYRS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:28)
[INFO] Main: Simulation completed successfully. (00:04:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.1060 | |
| 2 | A | A | 0.6246 | |
| 3 | A | A | 0.4167 | |
| 4 | A | A | 0.3144 | |
| 5 | A | A | 0.0878 | |
| 6 | A | A | -0.0152 | |
| 7 | A | A | -0.1862 | |
| 8 | G | A | -0.5262 | |
| 9 | A | A | -0.6332 | |
| 10 | G | A | -0.9693 | |
| 11 | P | A | -1.2279 | |
| 12 | E | A | -1.0132 | |
| 13 | M | A | -0.0887 | |
| 14 | V | A | -0.4240 | |
| 15 | R | A | -1.7791 | |
| 16 | G | A | -1.2482 | |
| 17 | Q | A | -1.0423 | |
| 18 | V | A | -0.2954 | |
| 19 | F | A | 0.0000 | |
| 20 | D | A | -1.9911 | |
| 21 | V | A | 0.0000 | |
| 22 | G | A | -1.7971 | |
| 23 | P | A | -1.1150 | |
| 24 | R | A | -0.9021 | |
| 25 | Y | A | 0.0000 | |
| 26 | T | A | -1.3034 | |
| 27 | N | A | -1.3740 | |
| 28 | L | A | -0.1674 | |
| 29 | S | A | 0.1389 | |
| 30 | Y | A | 0.4527 | |
| 31 | I | A | 0.7810 | |
| 32 | G | A | -0.3848 | |
| 33 | E | A | -1.7252 | |
| 34 | G | A | -1.3351 | |
| 35 | A | A | -0.4462 | |
| 36 | Y | A | -0.3857 | |
| 37 | G | A | -0.6805 | |
| 38 | M | A | 0.0000 | |
| 39 | V | A | 0.0891 | |
| 40 | C | A | 0.0000 | |
| 41 | S | A | 0.0000 | |
| 42 | A | A | 0.0000 | |
| 43 | Y | A | -0.2973 | |
| 44 | D | A | 0.0000 | |
| 45 | N | A | -0.8517 | |
| 46 | V | A | 0.4164 | |
| 47 | N | A | -1.1028 | |
| 48 | K | A | -1.3741 | |
| 49 | V | A | -0.0175 | |
| 50 | R | A | -0.5732 | |
| 51 | V | A | 0.0000 | |
| 52 | A | A | -0.2649 | |
| 53 | I | A | 0.0000 | |
| 54 | K | A | -0.2762 | |
| 55 | K | A | 0.0000 | |
| 56 | I | A | 0.0000 | |
| 57 | S | A | -0.9307 | |
| 58 | P | A | 0.0000 | |
| 59 | F | A | -1.9705 | |
| 60 | E | A | -2.8259 | |
| 61 | H | A | -2.3081 | |
| 62 | Q | A | -2.4312 | |
| 63 | T | A | -1.0846 | |
| 64 | Y | A | -0.6099 | |
| 65 | C | A | 0.0000 | |
| 66 | Q | A | 0.0000 | |
| 67 | R | A | -0.3158 | |
| 68 | T | A | 0.0000 | |
| 69 | L | A | 0.0000 | |
| 70 | R | A | 0.0000 | |
| 71 | E | A | 0.0000 | |
| 72 | I | A | 0.0000 | |
| 73 | K | A | -0.7007 | |
| 74 | I | A | 0.0000 | |
| 75 | L | A | 0.0000 | |
| 76 | L | A | -0.8728 | |
| 77 | R | A | -2.0133 | |
| 78 | S | A | -1.9601 | |
| 79 | R | A | -2.5194 | |
| 80 | H | A | 0.0000 | |
| 81 | E | A | -2.4084 | |
| 82 | N | A | 0.0000 | |
| 83 | I | A | 0.0000 | |
| 84 | I | A | 0.0000 | |
| 85 | G | A | -1.3751 | |
| 86 | I | A | -0.9038 | |
| 87 | N | A | -1.2055 | |
| 88 | D | A | -0.7248 | |
| 89 | I | A | 0.0000 | |
| 90 | I | A | -0.1662 | |
| 91 | R | A | -0.7895 | |
| 92 | A | A | -1.2807 | |
| 93 | P | A | -0.7448 | |
| 94 | T | A | -1.0574 | |
| 95 | I | A | -1.9153 | |
| 96 | E | A | -2.5598 | |
| 97 | Q | A | -2.5275 | |
| 98 | M | A | 0.0000 | |
| 99 | K | A | -2.6519 | |
| 100 | D | A | -1.3920 | |
| 101 | V | A | 0.0000 | |
| 102 | Y | A | 0.0000 | |
| 103 | I | A | 0.0000 | |
| 104 | V | A | 0.0000 | |
| 105 | Q | A | -0.9850 | |
| 106 | D | A | -1.3296 | |
| 107 | L | A | -0.4218 | |
| 108 | M | A | -0.9890 | |
| 109 | E | A | -1.7302 | |
| 110 | T | A | -0.9336 | |
| 111 | D | A | 0.0000 | |
| 112 | L | A | 0.0000 | |
| 113 | Y | A | -0.7343 | |
| 114 | K | A | -1.8702 | |
| 115 | L | A | -1.3294 | |
| 116 | L | A | 0.0000 | |
| 117 | K | A | -2.7645 | |
| 118 | T | A | -1.7540 | |
| 119 | Q | A | -1.9908 | |
| 120 | H | A | -1.8039 | |
| 121 | L | A | -1.2705 | |
| 122 | S | A | -1.5606 | |
| 123 | N | A | -2.2970 | |
| 124 | D | A | -2.5110 | |
| 125 | H | A | -1.5741 | |
| 126 | I | A | 0.0000 | |
| 127 | C | A | 0.0000 | |
| 128 | Y | A | -0.6763 | |
| 129 | F | A | 0.0000 | |
| 130 | L | A | 0.0000 | |
| 131 | Y | A | 0.0000 | |
| 132 | Q | A | 0.0000 | |
| 133 | I | A | 0.0000 | |
| 134 | L | A | 0.0000 | |
| 135 | R | A | 0.0000 | |
| 136 | G | A | 0.0000 | |
| 137 | L | A | 0.0000 | |
| 138 | K | A | -0.3055 | |
| 139 | Y | A | 0.0000 | |
| 140 | I | A | 0.0000 | |
| 141 | H | A | 0.0000 | |
| 142 | S | A | -0.1344 | |
| 143 | A | A | -0.6114 | |
| 144 | N | A | -0.8569 | |
| 145 | V | A | 0.0000 | |
| 146 | L | A | 0.0000 | |
| 147 | H | A | 0.0000 | |
| 148 | R | A | -0.5253 | |
| 149 | D | A | -0.5358 | |
| 150 | L | A | 0.0000 | |
| 151 | K | A | -0.2741 | |
| 152 | P | A | 0.0000 | |
| 153 | S | A | -0.2756 | |
| 154 | N | A | 0.0000 | |
| 155 | L | A | 0.0000 | |
| 156 | L | A | -0.3043 | |
| 157 | L | A | 0.0000 | |
| 158 | N | A | -1.0586 | |
| 159 | T | A | -0.7578 | |
| 160 | T | A | -0.5632 | |
| 161 | C | A | -0.6194 | |
| 162 | D | A | -1.0623 | |
| 163 | L | A | 0.0000 | |
| 164 | E | A | -0.8202 | |
| 165 | I | A | 0.0000 | |
| 166 | C | A | -0.2686 | |
| 167 | D | A | -0.6708 | |
| 168 | F | A | 0.0000 | |
| 169 | G | A | 0.0000 | |
| 170 | L | A | -0.2024 | |
| 171 | A | A | 0.0000 | |
| 172 | R | A | -0.4370 | |
| 173 | V | A | -0.4488 | |
| 174 | A | A | -0.9998 | |
| 175 | D | A | -1.8257 | |
| 176 | P | A | -2.0125 | |
| 177 | D | A | -2.7799 | |
| 178 | H | A | -2.5464 | |
| 179 | D | A | -1.9878 | |
| 180 | H | A | -1.4722 | |
| 181 | T | A | -0.6635 | |
| 182 | G | A | -0.3411 | |
| 183 | F | A | -0.1668 | |
| 184 | L | A | 0.4874 | |
| 185 | T | A | -0.4740 | |
| 186 | E | A | -0.9325 | |
| 187 | Y | A | 0.3341 | |
| 188 | V | A | 1.3931 | |
| 189 | A | A | 0.5338 | |
| 190 | T | A | -0.1827 | |
| 191 | R | A | -0.4301 | |
| 192 | W | A | -0.2506 | |
| 193 | Y | A | 0.0000 | |
| 194 | R | A | -0.1968 | |
| 195 | A | A | 0.0000 | |
| 196 | P | A | 0.0000 | |
| 197 | E | A | 0.0000 | |
| 198 | I | A | 0.1944 | |
| 199 | M | A | 0.0000 | |
| 200 | L | A | 0.0000 | |
| 201 | N | A | -0.1767 | |
| 202 | S | A | 0.0000 | |
| 203 | K | A | -1.1530 | |
| 204 | G | A | 0.0000 | |
| 205 | Y | A | -1.0324 | |
| 206 | T | A | -1.0540 | |
| 207 | K | A | -0.9807 | |
| 208 | S | A | -1.0610 | |
| 209 | I | A | 0.0000 | |
| 210 | D | A | 0.0000 | |
| 211 | I | A | 0.0000 | |
| 212 | W | A | 0.0000 | |
| 213 | S | A | 0.0000 | |
| 214 | V | A | 0.0000 | |
| 215 | G | A | 0.0000 | |
| 216 | C | A | 0.0000 | |
| 217 | I | A | 0.0000 | |
| 218 | L | A | 0.0000 | |
| 219 | A | A | 0.0000 | |
| 220 | E | A | 0.0000 | |
| 221 | M | A | 0.0000 | |
| 222 | L | A | -0.6961 | |
| 223 | S | A | -0.9636 | |
| 224 | N | A | -1.8334 | |
| 225 | R | A | -2.2136 | |
| 226 | P | A | -0.8377 | |
| 227 | I | A | -0.2327 | |
| 228 | F | A | 0.0000 | |
| 229 | P | A | -0.8222 | |
| 230 | G | A | 0.0000 | |
| 231 | K | A | -1.7738 | |
| 232 | H | A | -0.7926 | |
| 233 | Y | A | 0.4795 | |
| 234 | L | A | 0.3545 | |
| 235 | D | A | -0.7009 | |
| 236 | Q | A | 0.0000 | |
| 237 | L | A | 0.0000 | |
| 238 | N | A | -0.6988 | |
| 239 | H | A | -0.8003 | |
| 240 | I | A | 0.0000 | |
| 241 | L | A | 0.0000 | |
| 242 | G | A | -1.1688 | |
| 243 | I | A | -0.6724 | |
| 244 | L | A | 0.0000 | |
| 245 | G | A | 0.0000 | |
| 246 | S | A | -1.2515 | |
| 247 | P | A | -1.2149 | |
| 248 | S | A | -1.5623 | |
| 249 | Q | A | -2.3164 | |
| 250 | E | A | -2.8874 | |
| 251 | D | A | -2.1728 | |
| 252 | L | A | -1.3017 | |
| 253 | N | A | -1.7688 | |
| 254 | C | A | -0.5017 | |
| 255 | I | A | 0.0000 | |
| 256 | I | A | 1.6944 | |
| 257 | N | A | 0.4034 | |
| 258 | L | A | 0.5808 | |
| 259 | K | A | -1.1019 | |
| 260 | A | A | 0.0000 | |
| 261 | R | A | -0.5895 | |
| 262 | N | A | -1.0689 | |
| 263 | Y | A | -0.3301 | |
| 264 | L | A | 0.0000 | |
| 265 | L | A | 0.5215 | |
| 266 | S | A | 0.1466 | |
| 267 | L | A | -0.0126 | |
| 268 | P | A | -0.5937 | |
| 269 | H | A | -1.7352 | |
| 270 | K | A | -2.2848 | |
| 271 | N | A | -2.6001 | |
| 272 | K | A | -2.3704 | |
| 273 | V | A | -1.2741 | |
| 274 | P | A | -1.4388 | |
| 275 | W | A | 0.0000 | |
| 276 | N | A | -2.5512 | |
| 277 | R | A | -2.3360 | |
| 278 | L | A | -0.7787 | |
| 279 | F | A | 0.0000 | |
| 280 | P | A | -1.8837 | |
| 281 | N | A | -2.0416 | |
| 282 | A | A | -1.7955 | |
| 283 | D | A | -2.0962 | |
| 284 | S | A | -1.9603 | |
| 285 | K | A | -2.1925 | |
| 286 | A | A | 0.0000 | |
| 287 | L | A | 0.0000 | |
| 288 | D | A | -2.7905 | |
| 289 | L | A | 0.0000 | |
| 290 | L | A | 0.0000 | |
| 291 | D | A | -1.9731 | |
| 292 | K | A | -2.2835 | |
| 293 | M | A | 0.0000 | |
| 294 | L | A | 0.0000 | |
| 295 | T | A | -0.9885 | |
| 296 | F | A | -0.5203 | |
| 297 | N | A | 0.0000 | |
| 298 | P | A | -1.2695 | |
| 299 | H | A | -1.9941 | |
| 300 | K | A | -2.5694 | |
| 301 | R | A | 0.0000 | |
| 302 | I | A | 0.0000 | |
| 303 | E | A | -3.0807 | |
| 304 | V | A | 0.0000 | |
| 305 | E | A | -2.4406 | |
| 306 | Q | A | -2.4931 | |
| 307 | A | A | 0.0000 | |
| 308 | L | A | 0.0000 | |
| 309 | A | A | -1.1886 | |
| 310 | H | A | 0.0000 | |
| 311 | P | A | -1.3970 | |
| 312 | Y | A | 0.0000 | |
| 313 | L | A | 0.0000 | |
| 314 | E | A | -2.3374 | |
| 315 | Q | A | -2.0990 | |
| 316 | Y | A | -1.0236 | |
| 317 | Y | A | -1.3097 | |
| 318 | D | A | -1.8938 | |
| 319 | P | A | -1.2408 | |
| 320 | S | A | -1.2894 | |
| 321 | D | A | -2.0083 | |
| 322 | E | A | 0.0000 | |
| 323 | P | A | -0.5287 | |
| 324 | I | A | 0.9670 | |
| 325 | A | A | 0.0000 | |
| 326 | E | A | -1.7283 | |
| 327 | A | A | -1.1065 | |
| 328 | P | A | -0.8957 | |
| 329 | F | A | 0.0000 | |
| 330 | K | A | -2.2875 | |
| 331 | F | A | -1.7880 | |
| 332 | D | A | -2.3234 | |
| 333 | M | A | -1.9252 | |
| 334 | E | A | -2.9984 | |
| 335 | L | A | 0.0000 | |
| 336 | D | A | -3.1901 | |
| 337 | D | A | -3.0688 | |
| 338 | L | A | -2.2789 | |
| 339 | P | A | -2.1443 | |
| 340 | K | A | -2.9193 | |
| 341 | E | A | -3.3450 | |
| 342 | K | A | -2.6005 | |
| 343 | L | A | 0.0000 | |
| 344 | K | A | -2.8708 | |
| 345 | E | A | -2.9825 | |
| 346 | L | A | -1.9149 | |
| 347 | I | A | 0.0000 | |
| 348 | F | A | -1.5957 | |
| 349 | E | A | -2.5841 | |
| 350 | E | A | -1.8493 | |
| 351 | T | A | 0.0000 | |
| 352 | A | A | -1.4725 | |
| 353 | R | A | -2.3448 | |
| 354 | F | A | -1.1650 | |
| 355 | Q | A | -1.1038 | |
| 356 | P | A | -0.9796 | |
| 357 | G | A | -1.0440 | |
| 358 | Y | A | -0.7557 | |
| 359 | R | A | -1.9639 | |
| 360 | S | A | -0.9682 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine