Chain sequence(s) |
H: QVQLQESGGGVVQPGRSLRLSCAASGFSLTIYGVHWVRQAPGKGLEWLGVVWSDGRTDYNPSLKSRLTISKDNSKNTVYLQMNSLRAEDTAVYYCARYYLGSSFLTYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCSVSQGISNYLNWYQQKPGKAPKLLIYYTSSLHSGVPSRFSGSGSGTDYTFTISSLQPEDIATYYCQQYSILPWTFGQGTKVEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | YL108H |
Energy difference between WT (input) and mutated protein (by FoldX) | -0.285984 kcal/mol |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:33) [INFO] FoldX: Starting FoldX energy minimalization (00:00:36) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:09) [INFO] Main: Simulation completed successfully. (00:01:11) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.5125 | |
2 | V | H | -0.9810 | |
3 | Q | H | -1.7229 | |
4 | L | H | 0.0000 | |
5 | Q | H | -1.8321 | |
6 | E | H | 0.0000 | |
7 | S | H | -0.8132 | |
8 | G | H | -0.4087 | |
9 | G | H | 0.2316 | |
11 | G | H | 0.8249 | |
12 | V | H | 1.5675 | |
13 | V | H | -0.3153 | |
14 | Q | H | -1.7102 | |
15 | P | H | -2.0607 | |
16 | G | H | -2.1871 | |
17 | R | H | -2.7556 | |
18 | S | H | -1.7975 | |
19 | L | H | -0.8540 | |
20 | R | H | -1.1083 | |
21 | L | H | 0.0000 | |
22 | S | H | -0.6356 | |
23 | C | H | 0.0000 | |
24 | A | H | -1.0470 | |
25 | A | H | 0.0000 | |
26 | S | H | -1.2520 | |
27 | G | H | -1.0409 | |
28 | F | H | -0.1545 | |
29 | S | H | -0.0002 | |
30 | L | H | 0.0000 | |
35 | T | H | -0.1193 | |
36 | I | H | 1.3602 | |
37 | Y | H | 1.0958 | |
38 | G | H | 0.0000 | |
39 | V | H | 0.0000 | |
40 | H | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -0.5812 | |
45 | A | H | -1.0281 | |
46 | P | H | -1.0264 | |
47 | G | H | -1.4525 | |
48 | K | H | -2.3431 | |
49 | G | H | -1.5668 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.9029 | |
52 | W | H | 0.0000 | |
53 | L | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | V | H | 0.0000 | |
56 | V | H | 0.0000 | |
57 | W | H | -0.9633 | |
58 | S | H | -0.8661 | |
59 | D | H | -2.2600 | |
63 | G | H | -2.1769 | |
64 | R | H | -2.6292 | |
65 | T | H | -1.4639 | |
66 | D | H | -1.1000 | |
67 | Y | H | -0.6396 | |
68 | N | H | -0.9520 | |
69 | P | H | -1.1122 | |
70 | S | H | -0.7888 | |
71 | L | H | 0.0000 | |
72 | K | H | -1.5813 | |
74 | S | H | -1.0306 | |
75 | R | H | -0.9284 | |
76 | L | H | 0.0000 | |
77 | T | H | -0.6080 | |
78 | I | H | 0.0000 | |
79 | S | H | -0.6898 | |
80 | K | H | -1.2141 | |
81 | D | H | -1.7958 | |
82 | N | H | -2.3305 | |
83 | S | H | -1.8838 | |
84 | K | H | -2.5032 | |
85 | N | H | -1.8803 | |
86 | T | H | -1.3845 | |
87 | V | H | 0.0000 | |
88 | Y | H | -0.3100 | |
89 | L | H | 0.0000 | |
90 | Q | H | -0.7115 | |
91 | M | H | 0.0000 | |
92 | N | H | -1.5551 | |
93 | S | H | -1.7143 | |
94 | L | H | 0.0000 | |
95 | R | H | -2.5869 | |
96 | A | H | -1.7113 | |
97 | E | H | -2.2723 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.3497 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.7899 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | 0.0000 | |
107 | Y | H | 0.8537 | |
108 | L | H | 1.1158 | mutated: YL108H |
109 | L | H | 1.2534 | |
110 | G | H | 0.1039 | |
112 | S | H | 0.4684 | |
113 | S | H | 0.4774 | |
114 | F | H | 0.0000 | |
115 | L | H | 0.0000 | |
116 | T | H | 0.2078 | |
117 | Y | H | 0.1489 | |
118 | W | H | -0.4564 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.9809 | |
121 | G | H | -0.7747 | |
122 | T | H | 0.1673 | |
123 | L | H | 1.6720 | |
124 | V | H | 0.0000 | |
125 | T | H | 0.4249 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.4012 | |
128 | S | H | -0.4832 | |
1 | D | L | -1.9284 | |
2 | I | L | 0.0000 | |
3 | Q | L | -1.9659 | |
4 | M | L | 0.0000 | |
5 | T | L | -0.8600 | |
6 | Q | L | 0.0000 | |
7 | S | L | -0.4306 | |
8 | P | L | -0.6792 | |
9 | S | L | -0.9851 | |
10 | S | L | -1.3017 | |
11 | L | L | -1.0029 | |
12 | S | L | -1.3288 | |
13 | A | L | -1.1493 | |
14 | S | L | -0.8929 | |
15 | V | L | -0.0044 | |
16 | G | L | -0.8634 | |
17 | D | L | -1.9215 | |
18 | R | L | -2.3470 | |
19 | V | L | 0.0000 | |
20 | T | L | -0.6644 | |
21 | I | L | 0.0000 | |
22 | T | L | -0.4936 | |
23 | C | L | 0.0000 | |
24 | S | L | -1.1813 | |
25 | V | L | 0.0000 | |
26 | S | L | -1.5351 | |
27 | Q | L | -1.6663 | |
28 | G | L | -1.2109 | |
29 | I | L | 0.0000 | |
36 | S | L | -0.3472 | |
37 | N | L | -0.1331 | |
38 | Y | L | 0.9383 | |
39 | L | L | 0.0000 | |
40 | N | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | 0.0000 | |
44 | Q | L | -1.2437 | |
45 | K | L | -1.5612 | |
46 | P | L | -1.0836 | |
47 | G | L | -1.6546 | |
48 | K | L | -2.5707 | |
49 | A | L | -1.5865 | |
50 | P | L | 0.0000 | |
51 | K | L | -1.3264 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | 0.8804 | |
56 | Y | L | 1.2247 | |
57 | T | L | 0.0000 | |
65 | S | L | 0.1684 | |
66 | S | L | 0.3673 | |
67 | L | L | 0.3952 | |
68 | H | L | -0.2022 | |
69 | S | L | -0.3754 | |
70 | G | L | -0.5030 | |
71 | V | L | -0.3060 | |
72 | P | L | -0.3192 | |
74 | S | L | -0.3610 | |
75 | R | L | -0.7614 | |
76 | F | L | 0.0000 | |
77 | S | L | -0.2649 | |
78 | G | L | 0.0000 | |
79 | S | L | -0.5926 | |
80 | G | L | -1.0023 | |
83 | S | L | -1.0765 | |
84 | G | L | -1.2010 | |
85 | T | L | -1.4895 | |
86 | D | L | -2.0139 | |
87 | Y | L | 0.0000 | |
88 | T | L | -0.5818 | |
89 | F | L | 0.0000 | |
90 | T | L | 0.0000 | |
91 | I | L | 0.0000 | |
92 | S | L | -1.4420 | |
93 | S | L | -1.2649 | |
94 | L | L | 0.0000 | |
95 | Q | L | -0.8840 | |
96 | P | L | -1.1667 | |
97 | E | L | -1.6699 | |
98 | D | L | 0.0000 | |
99 | I | L | -0.6481 | |
100 | A | L | 0.0000 | |
101 | T | L | 0.0000 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | Q | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | Y | L | 0.0000 | |
108 | S | L | 0.7423 | |
109 | I | L | 1.4384 | |
114 | L | L | 0.6958 | |
115 | P | L | -0.0386 | |
116 | W | L | 0.0000 | |
117 | T | L | -0.5639 | |
118 | F | L | 0.0000 | |
119 | G | L | 0.0000 | |
120 | Q | L | -1.7379 | |
121 | G | L | 0.0000 | |
122 | T | L | 0.0000 | |
123 | K | L | -2.2000 | |
124 | V | L | 0.0000 | |
125 | E | L | -1.7664 | |
126 | I | L | -1.1299 | |
127 | K | L | -1.6760 |