Project name: 14ab73a03f40bd0 [mutate: YL108H]

Status: done

Started: 2025-10-07 21:47:08
Settings
Chain sequence(s) H: QVQLQESGGGVVQPGRSLRLSCAASGFSLTIYGVHWVRQAPGKGLEWLGVVWSDGRTDYNPSLKSRLTISKDNSKNTVYLQMNSLRAEDTAVYYCARYYLGSSFLTYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCSVSQGISNYLNWYQQKPGKAPKLLIYYTSSLHSGVPSRFSGSGSGTDYTFTISSLQPEDIATYYCQQYSILPWTFGQGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues YL108H
Energy difference between WT (input) and mutated protein (by FoldX) -0.285984 kcal/mol
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       FoldX:    Building mutant model                                                       (00:00:33)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:36)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:09)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:11)
Show buried residues

Minimal score value
-2.7556
Maximal score value
1.672
Average score
-0.5549
Total score value
-124.8439

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.5125
2 V H -0.9810
3 Q H -1.7229
4 L H 0.0000
5 Q H -1.8321
6 E H 0.0000
7 S H -0.8132
8 G H -0.4087
9 G H 0.2316
11 G H 0.8249
12 V H 1.5675
13 V H -0.3153
14 Q H -1.7102
15 P H -2.0607
16 G H -2.1871
17 R H -2.7556
18 S H -1.7975
19 L H -0.8540
20 R H -1.1083
21 L H 0.0000
22 S H -0.6356
23 C H 0.0000
24 A H -1.0470
25 A H 0.0000
26 S H -1.2520
27 G H -1.0409
28 F H -0.1545
29 S H -0.0002
30 L H 0.0000
35 T H -0.1193
36 I H 1.3602
37 Y H 1.0958
38 G H 0.0000
39 V H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.5812
45 A H -1.0281
46 P H -1.0264
47 G H -1.4525
48 K H -2.3431
49 G H -1.5668
50 L H 0.0000
51 E H -0.9029
52 W H 0.0000
53 L H 0.0000
54 G H 0.0000
55 V H 0.0000
56 V H 0.0000
57 W H -0.9633
58 S H -0.8661
59 D H -2.2600
63 G H -2.1769
64 R H -2.6292
65 T H -1.4639
66 D H -1.1000
67 Y H -0.6396
68 N H -0.9520
69 P H -1.1122
70 S H -0.7888
71 L H 0.0000
72 K H -1.5813
74 S H -1.0306
75 R H -0.9284
76 L H 0.0000
77 T H -0.6080
78 I H 0.0000
79 S H -0.6898
80 K H -1.2141
81 D H -1.7958
82 N H -2.3305
83 S H -1.8838
84 K H -2.5032
85 N H -1.8803
86 T H -1.3845
87 V H 0.0000
88 Y H -0.3100
89 L H 0.0000
90 Q H -0.7115
91 M H 0.0000
92 N H -1.5551
93 S H -1.7143
94 L H 0.0000
95 R H -2.5869
96 A H -1.7113
97 E H -2.2723
98 D H 0.0000
99 T H -0.3497
100 A H 0.0000
101 V H 0.7899
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 Y H 0.8537
108 L H 1.1158 mutated: YL108H
109 L H 1.2534
110 G H 0.1039
112 S H 0.4684
113 S H 0.4774
114 F H 0.0000
115 L H 0.0000
116 T H 0.2078
117 Y H 0.1489
118 W H -0.4564
119 G H 0.0000
120 Q H -1.9809
121 G H -0.7747
122 T H 0.1673
123 L H 1.6720
124 V H 0.0000
125 T H 0.4249
126 V H 0.0000
127 S H -0.4012
128 S H -0.4832
1 D L -1.9284
2 I L 0.0000
3 Q L -1.9659
4 M L 0.0000
5 T L -0.8600
6 Q L 0.0000
7 S L -0.4306
8 P L -0.6792
9 S L -0.9851
10 S L -1.3017
11 L L -1.0029
12 S L -1.3288
13 A L -1.1493
14 S L -0.8929
15 V L -0.0044
16 G L -0.8634
17 D L -1.9215
18 R L -2.3470
19 V L 0.0000
20 T L -0.6644
21 I L 0.0000
22 T L -0.4936
23 C L 0.0000
24 S L -1.1813
25 V L 0.0000
26 S L -1.5351
27 Q L -1.6663
28 G L -1.2109
29 I L 0.0000
36 S L -0.3472
37 N L -0.1331
38 Y L 0.9383
39 L L 0.0000
40 N L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L -1.2437
45 K L -1.5612
46 P L -1.0836
47 G L -1.6546
48 K L -2.5707
49 A L -1.5865
50 P L 0.0000
51 K L -1.3264
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.8804
56 Y L 1.2247
57 T L 0.0000
65 S L 0.1684
66 S L 0.3673
67 L L 0.3952
68 H L -0.2022
69 S L -0.3754
70 G L -0.5030
71 V L -0.3060
72 P L -0.3192
74 S L -0.3610
75 R L -0.7614
76 F L 0.0000
77 S L -0.2649
78 G L 0.0000
79 S L -0.5926
80 G L -1.0023
83 S L -1.0765
84 G L -1.2010
85 T L -1.4895
86 D L -2.0139
87 Y L 0.0000
88 T L -0.5818
89 F L 0.0000
90 T L 0.0000
91 I L 0.0000
92 S L -1.4420
93 S L -1.2649
94 L L 0.0000
95 Q L -0.8840
96 P L -1.1667
97 E L -1.6699
98 D L 0.0000
99 I L -0.6481
100 A L 0.0000
101 T L 0.0000
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 Y L 0.0000
108 S L 0.7423
109 I L 1.4384
114 L L 0.6958
115 P L -0.0386
116 W L 0.0000
117 T L -0.5639
118 F L 0.0000
119 G L 0.0000
120 Q L -1.7379
121 G L 0.0000
122 T L 0.0000
123 K L -2.2000
124 V L 0.0000
125 E L -1.7664
126 I L -1.1299
127 K L -1.6760
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Laboratory of Theory of Biopolymers 2018