| Chain sequence(s) |
A: PELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:00)
[INFO] Main: Simulation completed successfully. (00:00:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | P | A | -0.4839 | |
| 2 | E | A | -0.8044 | |
| 3 | L | A | 1.1535 | |
| 4 | L | A | 1.4407 | |
| 5 | G | A | 0.1893 | |
| 6 | G | A | 0.1714 | |
| 7 | P | A | 0.0877 | |
| 8 | S | A | 0.7470 | |
| 9 | V | A | 2.7473 | |
| 10 | F | A | 3.5753 | |
| 11 | L | A | 3.5157 | |
| 12 | F | A | 2.2381 | |
| 13 | P | A | 0.1708 | |
| 14 | P | A | -1.3133 | |
| 15 | K | A | -2.3820 | |
| 16 | P | A | -1.5883 | |
| 17 | K | A | -1.8124 | |
| 18 | D | A | -1.4279 | |
| 19 | T | A | -0.4224 | |
| 20 | L | A | 1.1494 | |
| 21 | M | A | 1.3276 | |
| 22 | I | A | 1.9647 | |
| 23 | S | A | 0.5750 | |
| 24 | R | A | -0.6485 | |
| 25 | T | A | -0.8795 | |
| 26 | P | A | -1.3429 | |
| 27 | E | A | -1.5296 | |
| 28 | V | A | 0.2802 | |
| 29 | T | A | 0.7855 | |
| 30 | C | A | 1.9749 | |
| 31 | V | A | 0.0000 | |
| 32 | V | A | 0.0000 | |
| 33 | V | A | -0.0635 | |
| 34 | D | A | -1.2979 | |
| 35 | V | A | 0.0000 | |
| 36 | S | A | -2.3641 | |
| 37 | H | A | -3.0433 | |
| 38 | E | A | -3.4430 | |
| 39 | D | A | -3.5052 | |
| 40 | P | A | -3.0857 | |
| 41 | E | A | -3.1324 | |
| 42 | V | A | -1.8308 | |
| 43 | K | A | -2.0722 | |
| 44 | F | A | -1.1970 | |
| 45 | N | A | -1.2942 | |
| 46 | W | A | 0.3802 | |
| 47 | Y | A | 1.5049 | |
| 48 | V | A | 1.6991 | |
| 49 | D | A | -0.5091 | |
| 50 | G | A | 0.3196 | |
| 51 | V | A | 1.6468 | |
| 52 | E | A | 0.1447 | |
| 53 | V | A | 0.0788 | |
| 54 | H | A | -1.7843 | |
| 55 | N | A | -2.0281 | |
| 56 | A | A | -1.8341 | |
| 57 | K | A | -2.4234 | |
| 58 | T | A | -2.0715 | |
| 59 | K | A | -2.7664 | |
| 60 | P | A | -2.4053 | |
| 61 | R | A | -3.1059 | |
| 62 | E | A | -3.1595 | |
| 63 | E | A | -3.0331 | |
| 64 | Q | A | -1.5431 | |
| 65 | Y | A | 0.1766 | |
| 66 | N | A | -1.0767 | |
| 67 | S | A | -1.1907 | |
| 68 | T | A | -1.8711 | |
| 69 | Y | A | -2.4558 | |
| 70 | R | A | -2.0848 | |
| 71 | V | A | 0.0000 | |
| 72 | V | A | 0.0000 | |
| 73 | S | A | 0.0000 | |
| 74 | V | A | -0.5342 | |
| 75 | L | A | -0.3938 |