| Chain sequence(s) |
L: KAAQGGIVGDGGGGTD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:03)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 253 | K | L | -2.1707 | |
| 254 | A | L | -0.2750 | |
| 255 | A | L | -0.1031 | |
| 256 | Q | L | -1.0219 | |
| 257 | G | L | -0.7144 | |
| 258 | G | L | -0.1958 | |
| 259 | I | L | 2.2505 | |
| 260 | V | L | 2.0482 | |
| 261 | G | L | -0.4793 | |
| 262 | D | L | -1.9622 | |
| 263 | G | L | -0.8797 | |
| 264 | G | L | -0.6643 | |
| 265 | G | L | -0.4851 | |
| 266 | G | L | -0.0433 | |
| 267 | T | L | -0.4104 | |
| 268 | D | L | -2.2604 |