| Chain sequence(s) |
A: MNDPNSDNATSGASPESNFNNILSVVLSTVLTILLALVMFSMGCNVEIKKFLGHIKRPWGICVGFLCQFGIMPLTGFILSVAFDILPLQAVVVLIIGCCPGGTASNILAYWVDGDMDLSVSMTTCSTLLALGMMPLCLLIYTKMWVDSGSIVIPYDNIGTSLVSLVVPVSIGMFVNHKWPQKAKIILKIGSIAGAILIVLIAVVGGILYQSAWIIAPKLWIIGTIFPVAGYSLGFLLARIAGLPWYRCRTVAFETGMQNTQLCSTIVQLSFTPEELNVVFTFPLIYSIFQLAFAAIFLGFYVAYKKCHGKNKAEIPESKENGTEPESSFYKANGGFQPDEK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:04)
[INFO] Main: Simulation completed successfully. (00:05:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -0.0286 | |
| 2 | N | A | -1.8431 | |
| 3 | D | A | -2.6353 | |
| 4 | P | A | -2.2059 | |
| 5 | N | A | -2.7293 | |
| 6 | S | A | -2.3111 | |
| 7 | D | A | -2.8831 | |
| 8 | N | A | -2.3891 | |
| 9 | A | A | -1.3069 | |
| 10 | T | A | -0.9341 | |
| 11 | S | A | -0.6421 | |
| 12 | G | A | -0.6561 | |
| 13 | A | A | -0.7081 | |
| 14 | S | A | -0.9843 | |
| 15 | P | A | -1.5360 | |
| 16 | E | A | -2.4308 | |
| 17 | S | A | -1.3151 | |
| 18 | N | A | -0.8990 | |
| 19 | F | A | 1.2414 | |
| 20 | N | A | -0.1319 | |
| 21 | N | A | 0.4664 | |
| 22 | I | A | 2.9216 | |
| 23 | L | A | 2.4293 | |
| 24 | S | A | 2.0412 | |
| 25 | V | A | 3.4381 | |
| 26 | V | A | 3.4224 | |
| 27 | L | A | 2.5162 | |
| 28 | S | A | 2.0359 | |
| 29 | T | A | 2.1794 | |
| 30 | V | A | 2.5869 | |
| 31 | L | A | 2.0933 | |
| 32 | T | A | 1.6697 | |
| 33 | I | A | 2.6081 | |
| 34 | L | A | 1.9385 | |
| 35 | L | A | 0.0000 | |
| 36 | A | A | 1.4900 | |
| 37 | L | A | 1.3523 | |
| 38 | V | A | 0.0000 | |
| 39 | M | A | 0.0000 | |
| 40 | F | A | 1.3646 | |
| 41 | S | A | 0.0000 | |
| 42 | M | A | 0.0000 | |
| 43 | G | A | 0.0000 | |
| 44 | C | A | 0.0000 | |
| 45 | N | A | -0.6933 | |
| 46 | V | A | 0.0000 | |
| 47 | E | A | -0.8371 | |
| 48 | I | A | -0.4147 | |
| 49 | K | A | -1.6860 | |
| 50 | K | A | -1.1675 | |
| 51 | F | A | -0.0301 | |
| 52 | L | A | 0.4724 | |
| 53 | G | A | -0.5214 | |
| 54 | H | A | 0.0000 | |
| 55 | I | A | 0.3127 | |
| 56 | K | A | -1.6844 | |
| 57 | R | A | -1.9130 | |
| 58 | P | A | -0.5930 | |
| 59 | W | A | 0.4715 | |
| 60 | G | A | 0.0000 | |
| 61 | I | A | 0.8172 | |
| 62 | C | A | 1.0744 | |
| 63 | V | A | 0.0000 | |
| 64 | G | A | 0.0000 | |
| 65 | F | A | 1.4430 | |
| 66 | L | A | 1.3506 | |
| 67 | C | A | 0.0000 | |
| 68 | Q | A | 0.0000 | |
| 69 | F | A | 0.0000 | |
| 70 | G | A | 0.6755 | |
| 71 | I | A | 1.0299 | |
| 72 | M | A | 0.0000 | |
| 73 | P | A | 0.0000 | |
| 74 | L | A | 1.6755 | |
| 75 | T | A | 0.0000 | |
| 76 | G | A | 0.0000 | |
| 77 | F | A | 2.0354 | |
| 78 | I | A | 2.6217 | |
| 79 | L | A | 0.0000 | |
| 80 | S | A | 0.0000 | |
| 81 | V | A | 1.5708 | |
| 82 | A | A | 0.9118 | |
| 83 | F | A | 0.4265 | |
| 84 | D | A | -0.8044 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.8405 | |
| 87 | P | A | 0.6560 | |
| 88 | L | A | 0.0000 | |
| 89 | Q | A | 0.1320 | |
| 90 | A | A | 0.0000 | |
| 91 | V | A | 0.0000 | |
| 92 | V | A | 0.0000 | |
| 93 | V | A | 0.0000 | |
| 94 | L | A | 0.0000 | |
| 95 | I | A | 0.0000 | |
| 96 | I | A | 0.0000 | |
| 97 | G | A | 0.0000 | |
| 98 | C | A | 0.0000 | |
| 99 | C | A | 0.0000 | |
| 100 | P | A | 0.0000 | |
| 101 | G | A | 0.0000 | |
| 102 | G | A | 0.0000 | |
| 103 | T | A | 0.1851 | |
| 104 | A | A | 0.5321 | |
| 105 | S | A | 0.0000 | |
| 106 | N | A | 0.9165 | |
| 107 | I | A | 2.0707 | |
| 108 | L | A | 0.0000 | |
| 109 | A | A | 0.0000 | |
| 110 | Y | A | 1.7033 | |
| 111 | W | A | 2.0816 | |
| 112 | V | A | 0.0000 | |
| 113 | D | A | 0.4494 | |
| 114 | G | A | 0.0000 | |
| 115 | D | A | -0.4418 | |
| 116 | M | A | -0.1481 | |
| 117 | D | A | -1.3875 | |
| 118 | L | A | 0.0000 | |
| 119 | S | A | 0.0000 | |
| 120 | V | A | -0.1567 | |
| 121 | S | A | 0.0000 | |
| 122 | M | A | 0.0000 | |
| 123 | T | A | 0.0000 | |
| 124 | T | A | 0.0000 | |
| 125 | C | A | 0.0000 | |
| 126 | S | A | 0.0000 | |
| 127 | T | A | 0.0000 | |
| 128 | L | A | 0.9529 | |
| 129 | L | A | 1.2093 | |
| 130 | A | A | 0.0000 | |
| 131 | L | A | 1.3464 | |
| 132 | G | A | 0.5887 | |
| 133 | M | A | 0.7639 | |
| 134 | M | A | 0.0000 | |
| 135 | P | A | 0.7263 | |
| 136 | L | A | 1.6127 | |
| 137 | C | A | 0.0000 | |
| 138 | L | A | 0.0000 | |
| 139 | L | A | 1.8370 | |
| 140 | I | A | 2.2947 | |
| 141 | Y | A | 1.6801 | |
| 142 | T | A | 0.0000 | |
| 143 | K | A | -0.7062 | |
| 144 | M | A | -0.1796 | |
| 145 | W | A | 0.0000 | |
| 146 | V | A | -0.2164 | |
| 147 | D | A | -1.7756 | |
| 148 | S | A | -1.1819 | |
| 149 | G | A | -0.6610 | |
| 150 | S | A | 0.0327 | |
| 151 | I | A | 0.7667 | |
| 152 | V | A | 1.7496 | |
| 153 | I | A | 0.0000 | |
| 154 | P | A | -0.2503 | |
| 155 | Y | A | -0.4471 | |
| 156 | D | A | -2.0720 | |
| 157 | N | A | -1.2860 | |
| 158 | I | A | 0.0000 | |
| 159 | G | A | -0.4629 | |
| 160 | T | A | -0.1511 | |
| 161 | S | A | 0.0000 | |
| 162 | L | A | 0.0000 | |
| 163 | V | A | 2.1638 | |
| 164 | S | A | 1.3072 | |
| 165 | L | A | 0.0000 | |
| 166 | V | A | 2.2474 | |
| 167 | V | A | 2.6511 | |
| 168 | P | A | 1.9620 | |
| 169 | V | A | 0.0000 | |
| 170 | S | A | 1.8563 | |
| 171 | I | A | 2.3869 | |
| 172 | G | A | 0.0000 | |
| 173 | M | A | 0.9733 | |
| 174 | F | A | 1.6530 | |
| 175 | V | A | 0.0000 | |
| 176 | N | A | 0.0000 | |
| 177 | H | A | -1.2091 | |
| 178 | K | A | -1.7165 | |
| 179 | W | A | -1.2536 | |
| 180 | P | A | -1.7528 | |
| 181 | Q | A | -2.3446 | |
| 182 | K | A | -2.1015 | |
| 183 | A | A | 0.0000 | |
| 184 | K | A | -2.0741 | |
| 185 | I | A | -0.4396 | |
| 186 | I | A | 0.0000 | |
| 187 | L | A | -0.3261 | |
| 188 | K | A | -0.7018 | |
| 189 | I | A | 1.0221 | |
| 190 | G | A | 0.0000 | |
| 191 | S | A | 0.8054 | |
| 192 | I | A | 1.8471 | |
| 193 | A | A | 0.0000 | |
| 194 | G | A | 0.0000 | |
| 195 | A | A | 1.9429 | |
| 196 | I | A | 3.0066 | |
| 197 | L | A | 0.0000 | |
| 198 | I | A | 2.1723 | |
| 199 | V | A | 3.2352 | |
| 200 | L | A | 2.5834 | |
| 201 | I | A | 0.0000 | |
| 202 | A | A | 2.1683 | |
| 203 | V | A | 3.0716 | |
| 204 | V | A | 0.0000 | |
| 205 | G | A | 0.0000 | |
| 206 | G | A | 1.6069 | |
| 207 | I | A | 2.6142 | |
| 208 | L | A | 1.6861 | |
| 209 | Y | A | 0.4440 | |
| 210 | Q | A | 0.0704 | |
| 211 | S | A | 0.3826 | |
| 212 | A | A | 0.0000 | |
| 213 | W | A | 1.6521 | |
| 214 | I | A | 2.2832 | |
| 215 | I | A | 1.4955 | |
| 216 | A | A | 0.7735 | |
| 217 | P | A | 0.2952 | |
| 218 | K | A | -0.2266 | |
| 219 | L | A | 0.0000 | |
| 220 | W | A | 1.2226 | |
| 221 | I | A | 1.7629 | |
| 222 | I | A | 0.0000 | |
| 223 | G | A | 0.0000 | |
| 224 | T | A | 1.5311 | |
| 225 | I | A | 1.5436 | |
| 226 | F | A | 0.0000 | |
| 227 | P | A | 0.0000 | |
| 228 | V | A | 0.9967 | |
| 229 | A | A | 0.6823 | |
| 230 | G | A | 0.0000 | |
| 231 | Y | A | 0.0000 | |
| 232 | S | A | 0.8381 | |
| 233 | L | A | 1.3145 | |
| 234 | G | A | 0.0000 | |
| 235 | F | A | 1.5118 | |
| 236 | L | A | 2.1283 | |
| 237 | L | A | 1.8315 | |
| 238 | A | A | 0.0000 | |
| 239 | R | A | 0.8106 | |
| 240 | I | A | 1.9826 | |
| 241 | A | A | 0.9203 | |
| 242 | G | A | 0.1636 | |
| 243 | L | A | 0.0000 | |
| 244 | P | A | 0.1158 | |
| 245 | W | A | 0.9052 | |
| 246 | Y | A | 0.5387 | |
| 247 | R | A | -0.1386 | |
| 248 | C | A | 0.0000 | |
| 249 | R | A | 0.2878 | |
| 250 | T | A | 0.0000 | |
| 251 | V | A | 0.0000 | |
| 252 | A | A | 0.0000 | |
| 253 | F | A | 0.0000 | |
| 254 | E | A | 0.0000 | |
| 255 | T | A | 0.0000 | |
| 256 | G | A | 0.0000 | |
| 257 | M | A | 0.0000 | |
| 258 | Q | A | 0.0000 | |
| 259 | N | A | 0.0000 | |
| 260 | T | A | 0.0000 | |
| 261 | Q | A | -0.0921 | |
| 262 | L | A | 0.0000 | |
| 263 | C | A | 0.0000 | |
| 264 | S | A | 0.0000 | |
| 265 | T | A | 0.0000 | |
| 266 | I | A | 0.0000 | |
| 267 | V | A | 0.0000 | |
| 268 | Q | A | -0.1371 | |
| 269 | L | A | 0.3510 | |
| 270 | S | A | 0.0000 | |
| 271 | F | A | 0.0000 | |
| 272 | T | A | -0.9191 | |
| 273 | P | A | -1.1324 | |
| 274 | E | A | -2.1423 | |
| 275 | E | A | -1.3513 | |
| 276 | L | A | 0.0000 | |
| 277 | N | A | -0.5097 | |
| 278 | V | A | 0.6481 | |
| 279 | V | A | 0.0000 | |
| 280 | F | A | 0.0000 | |
| 281 | T | A | 0.0000 | |
| 282 | F | A | 0.0000 | |
| 283 | P | A | 0.0000 | |
| 284 | L | A | 0.0000 | |
| 285 | I | A | 0.0000 | |
| 286 | Y | A | 0.0000 | |
| 287 | S | A | 1.3571 | |
| 288 | I | A | 2.5747 | |
| 289 | F | A | 2.0643 | |
| 290 | Q | A | 0.0000 | |
| 291 | L | A | 2.1633 | |
| 292 | A | A | 1.8108 | |
| 293 | F | A | 1.7340 | |
| 294 | A | A | 0.0000 | |
| 295 | A | A | 1.4643 | |
| 296 | I | A | 2.1910 | |
| 297 | F | A | 2.2016 | |
| 298 | L | A | 2.0442 | |
| 299 | G | A | 1.7776 | |
| 300 | F | A | 2.6884 | |
| 301 | Y | A | 1.8030 | |
| 302 | V | A | 1.4363 | |
| 303 | A | A | 0.8281 | |
| 304 | Y | A | 0.8872 | |
| 305 | K | A | -1.2813 | |
| 306 | K | A | -2.0688 | |
| 307 | C | A | -1.4509 | |
| 308 | H | A | -2.6111 | |
| 309 | G | A | -3.2435 | |
| 310 | K | A | -3.8418 | |
| 311 | N | A | -3.5126 | |
| 312 | K | A | -3.0767 | |
| 313 | A | A | -2.4516 | |
| 314 | E | A | -2.4481 | |
| 315 | I | A | -0.3609 | |
| 316 | P | A | -1.1306 | |
| 317 | E | A | -2.5543 | |
| 318 | S | A | -2.3210 | |
| 319 | K | A | -3.6460 | |
| 320 | E | A | -3.7150 | |
| 321 | N | A | -3.0514 | |
| 322 | G | A | -2.1411 | |
| 323 | T | A | -1.9372 | |
| 324 | E | A | -2.7656 | |
| 325 | P | A | -2.2031 | |
| 326 | E | A | -2.4660 | |
| 327 | S | A | -1.1371 | |
| 328 | S | A | -0.5773 | |
| 329 | F | A | 0.2397 | |
| 330 | Y | A | 0.2983 | |
| 331 | K | A | -1.5808 | |
| 332 | A | A | -0.6686 | |
| 333 | N | A | -0.7730 | |
| 334 | G | A | -0.9594 | |
| 335 | G | A | -0.2833 | |
| 336 | F | A | 0.7782 | |
| 337 | Q | A | -1.3260 | |
| 338 | P | A | -1.9222 | |
| 339 | D | A | -3.3251 | |
| 340 | E | A | -3.7706 | |
| 341 | K | A | -3.1281 |