Project name: 80-6

Status: done

Started: 2026-03-12 08:37:29
Settings
Chain sequence(s) A: APMPKEEQRKLVEEIYEKIKELALKNNASEDTLMWLDVFYDSAMWMVEEDEPYEEVMMVFEIYISFVEGELKEELKKIIE
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:40)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:41)
Show buried residues

Minimal score value
-3.8738
Maximal score value
1.3581
Average score
-1.4434
Total score value
-115.4699

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.0168
2 P A -0.1796
3 M A -0.5406
4 P A -1.5575
5 K A -2.8277
6 E A -3.3050
7 E A -2.9456
8 Q A -2.4132
9 R A -2.9279
10 K A -3.4829
11 L A -2.2405
12 V A 0.0000
13 E A -3.1918
14 E A -3.3382
15 I A -2.0090
16 Y A -2.6477
17 E A -3.6335
18 K A -3.0571
19 I A 0.0000
20 K A -2.3445
21 E A -2.7155
22 L A -1.8711
23 A A 0.0000
24 L A -0.7793
25 K A -2.0550
26 N A -2.0795
27 N A -1.6991
28 A A -1.3680
29 S A -1.6182
30 E A -2.3646
31 D A -2.2282
32 T A -0.8105
33 L A -0.4754
34 M A -0.0348
35 W A 0.6241
36 L A 0.0000
37 D A -0.4251
38 V A 0.6084
39 F A 0.5523
40 Y A -0.5087
41 D A -1.0661
42 S A -0.2960
43 A A 0.0000
44 M A -0.8775
45 W A -0.4212
46 M A 0.0000
47 V A 0.0000
48 E A -2.6214
49 E A -3.0985
50 D A -3.2904
51 E A -2.7278
52 P A -2.0578
53 Y A -1.5636
54 E A -2.2833
55 E A -2.1735
56 V A 0.0000
57 M A -0.7787
58 M A -0.7477
59 V A 0.0000
60 F A 0.0000
61 E A -1.4097
62 I A 0.3932
63 Y A 0.0000
64 I A 0.0000
65 S A 0.0414
66 F A 1.3581
67 V A 0.0000
68 E A -2.4348
69 G A -2.8621
70 E A -3.3761
71 L A 0.0000
72 K A -2.9755
73 E A -3.8738
74 E A -2.7765
75 L A 0.0000
76 K A -3.1117
77 K A -3.0482
78 I A -1.6983
79 I A -1.3182
80 E A -2.4669
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Laboratory of Theory of Biopolymers 2018