| Chain sequence(s) |
A: IVKGH
C: IVKGH B: IVKGH E: IVKGH D: IVKGH G: IVKGH F: IVKGH H: IVKGH input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:51)
[INFO] Main: Simulation completed successfully. (00:00:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 3.7763 | |
| 2 | V | A | 1.3121 | |
| 3 | K | A | -1.3383 | |
| 4 | G | A | -1.0620 | |
| 5 | H | A | -1.5685 | |
| 1 | I | B | 3.8614 | |
| 2 | V | B | 1.3999 | |
| 3 | K | B | -1.4288 | |
| 4 | G | B | -1.2732 | |
| 5 | H | B | -1.7925 | |
| 1 | I | C | 3.3993 | |
| 2 | V | C | 0.8478 | |
| 3 | K | C | -1.6647 | |
| 4 | G | C | -1.6893 | |
| 5 | H | C | -1.7209 | |
| 1 | I | D | 3.3707 | |
| 2 | V | D | 1.1568 | |
| 3 | K | D | -1.6798 | |
| 4 | G | D | -1.1754 | |
| 5 | H | D | -1.5309 | |
| 1 | I | E | 3.1848 | |
| 2 | V | E | 1.7502 | |
| 3 | K | E | -1.0379 | |
| 4 | G | E | -1.2421 | |
| 5 | H | E | -1.4815 | |
| 1 | I | F | 3.1451 | |
| 2 | V | F | 1.7760 | |
| 3 | K | F | -0.7553 | |
| 4 | G | F | -1.1409 | |
| 5 | H | F | -1.6708 | |
| 1 | I | G | 3.9165 | |
| 2 | V | G | 1.4999 | |
| 3 | K | G | -1.2167 | |
| 4 | G | G | -1.4049 | |
| 5 | H | G | -1.6223 | |
| 1 | I | H | 3.8835 | |
| 2 | V | H | 1.1203 | |
| 3 | K | H | -1.3692 | |
| 4 | G | H | -1.4747 | |
| 5 | H | H | -1.6995 |