Project name: IVKGH8

Status: done

Started: 2026-02-10 05:41:03
Settings
Chain sequence(s) A: IVKGH
C: IVKGH
B: IVKGH
E: IVKGH
D: IVKGH
G: IVKGH
F: IVKGH
H: IVKGH
input PDB
Selected Chain(s) A,C,B,E,D,G,F,H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:51)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:53)
Show buried residues

Minimal score value
-1.7925
Maximal score value
3.9165
Average score
0.134
Total score value
5.3605

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 I A 3.7763
2 V A 1.3121
3 K A -1.3383
4 G A -1.0620
5 H A -1.5685
1 I B 3.8614
2 V B 1.3999
3 K B -1.4288
4 G B -1.2732
5 H B -1.7925
1 I C 3.3993
2 V C 0.8478
3 K C -1.6647
4 G C -1.6893
5 H C -1.7209
1 I D 3.3707
2 V D 1.1568
3 K D -1.6798
4 G D -1.1754
5 H D -1.5309
1 I E 3.1848
2 V E 1.7502
3 K E -1.0379
4 G E -1.2421
5 H E -1.4815
1 I F 3.1451
2 V F 1.7760
3 K F -0.7553
4 G F -1.1409
5 H F -1.6708
1 I G 3.9165
2 V G 1.4999
3 K G -1.2167
4 G G -1.4049
5 H G -1.6223
1 I H 3.8835
2 V H 1.1203
3 K H -1.3692
4 G H -1.4747
5 H H -1.6995
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Laboratory of Theory of Biopolymers 2018